Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0020 |
Symbol | |
ID | 6201896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 24338 |
End bp | 24817 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641701544 |
Product | type IV pilus modification protein PilV |
Protein accession | YP_001828752 |
Protein GI | 182680592 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4967] Tfp pilus assembly protein PilV |
TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.908433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATCG CAAGCAAAAA AGCCGTTGCC GGCGTTAGTT TGATCGAAGT GCTGATTTCG GTATTTATTC TCGCCGTTGG CATGCTAGGC GTTGCGGCAA TGCAAGTCAT GGCGTTACGC AACAATGATA GTGCTCTGCA GCGTAGCCAT GCAGTGATTC AGTCGTACGC GATTCTTGAA GCAATGCGCG CCAATCGCAG CGAAGCGATC AAAGGCAGTT ACAACACCAA TGGAATGGTT TGTACTGCGC CGCAAGCGAA CAGCCTGGTC GATGTTGATC GTCGTGATTG GATAAGCAAC CTTAAGGCGG CGCTCGGTAA TTCTGAAAGA ACCTGTGGTT CGATCTCTTG TGATGCCGCC AATACATGCA CGATCCAGGT GCAATGGGAC GAGACTCGTG CGAGTGATAA AAGGTCCCCA GCCGGTCAGC TTGTCTCTTC CACGCAGACT CAAATTTTTG AAGTGAGGAG TAAACTGTGA
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Protein sequence | MSIASKKAVA GVSLIEVLIS VFILAVGMLG VAAMQVMALR NNDSALQRSH AVIQSYAILE AMRANRSEAI KGSYNTNGMV CTAPQANSLV DVDRRDWISN LKAALGNSER TCGSISCDAA NTCTIQVQWD ETRASDKRSP AGQLVSSTQT QIFEVRSKL
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