Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | XfasM23_0005 |
Symbol | gyrB |
ID | 6202192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M23 |
Kingdom | Bacteria |
Replicon accession | NC_010577 |
Strand | + |
Start bp | 4634 |
End bp | 7078 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641701528 |
Product | DNA gyrase subunit B |
Protein accession | YP_001828737 |
Protein GI | 182680577 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAA AGCAGAATAC ATCGCTGCTC AGTAATGGCG GCATATATGA CTCAAGTAAA ATCACAGTAC TACGTGGACT GGATGCTGTT CGCAAGCGTC CAGGGATGTA TATCGGAGAT GTCCATGACG GTACAGGTTT GCACCACATG GTGTTTGAAG TTGTCGATAA CTCGGTGGAT GAGGCATTAG CTGGTCATGC CGACAGCATT CTTGTCAAGA TCCATATTGA TGGGTCTGTC TCTGTTTCGG ATAACGGTCG AGGTATCCCT GTAGATATTC ATAAAGAAGA GGGTGTTTCT GCCGCTGAAG TGATCCTGAC AGTTTTACAT GCTGGTGGTA AGTTCGACGA TAATAGCTAT AAGGTTTCTG GTGGTTTGCA TGGGGTAGGA GTTTCAGTGG TCAACGCCCT TTCTGAGCGA TTATGGCTTG ATATTTGGCG TGATGGTTAC CACTACCAAC AAGAATATGT TTTGGGTGAG CCGCAATATC CTCTTAAGCA GTTAGAGGTG TCAGCGAAAC GCGGTACTAC ATTACGTTTT AAACCGGCAA AAGAGATCTT CAGTGATGTG GAGTTTCATT ACGAAAATCT TGCAAAGCGC CTCCGTGAGT TATCCTTCCT CAATTCCGGC CTTAAAGTTA GTTTGATTGA TGAACGTGGT GAGGGTCGGC GTGACGATTT TCACTATGAA GGTGGTATTC GTAGCTTTGT AGAACATTTA GCTCAATTGA AGACCCCATT GCATCCGAAT GTAATTTCGG TCACAGGGGA GCACAACGGC ATTGTTGTGG ATGCTGCTTT ACAGTGGACT GATGCCTACC AAGAAACAAT GTATTGTTTT ACAAATAACA TTCCACAAAA AGATGGCGGT ACCCACCTTG CTGGCTTCCG TGCTGCATTG ACTCGTACGT TGGGTAATTA CATTGAGCAG AATGGGGTTG CTAGGCAAGC GAAGATCACT TTTTCTGGTG ATGATATGCG TGAAGGTATG ATTGCCGTGT TATCGGTAAA AGTCCCTGAA CCTAGTTTTT CTTCCCAAAC CAAGGAAAAG TTGGTGAGCT CCGATGTCAA GCCGGCAGTG GAAGCTACCT TTGGCTTGCG TTTGGAGGAA TTCTTACAAG AGAATCCTAA CGAAGCACGT GCAATTGCTG GAAAGATTGT CGATGCTGCT CGTGCTCGCG AGGCTGCTCG CAAAGCCCGC GATTTAACCC GTCGAAAAGG TGTGCTTGAT ATCGCCGGTT TGCCAGGTAA GTTGGCAGAT TGCCAAGAGA AAGACCCAGC GATGTCAGAA TTGTTTATCG TCGAAGGGGA TTCTGCTGGT GGTTCTGCAA AGCAGGGGCG TAACCGAAAA AATCAGGCAG TATTGCCGCT CAGGGGCAAG ATTCTTAACG TTGAACGTGC ACGATTCGAC CGTATGCTCT CTAGTGCTGA GGTTGGCACA TTGATCACGG CCCTTGGGAC AGGCATCGGT AAGGACGAAT ATAACCCAGA TAAGCTACGT TACCATCGCG TCATCATTAT GACCGATGCG GATGTGGATG GTTCGCATAT CCGTACTTTA TTGCTGACGT TTTTTTACAG GCAAATGCCA GAATTGATTG AACGTGGCCA TATCTATATT GGCTTGCCGC CCTTGTACAA GCTAAAGCAG GGTAAGAGTG AGCTGTACTT AAAGGACGAT ATCGCATTGA ATGTTTATTT GGCGAATAGC GCGGTTGAAG GAGCGCAATT ACTCCCCGCT GAAGGTGAGC CGCCCATTGA GGGTCTTGCA TTGGAGAAAT TGCTGATTAC ATATATCGCC GCAAAAGATA CTATCGTGCG TCATTCGCAT CGCTATGATT CTCGCCTCCT GGAAGCACTG CTTGAATTTA CTCCCTTGGA TTCGACTTGC TTTCAATCCT ACAGTGATAG CGAACATCTA CAATCGCTGA TGGCATTGCT GAACCAGTCT AGCTTGGGTG CTCCGCGTTA TATTCTTAAG ATGCAGTTTC CTGATGAACA ACATTCTGCC GCCTTGTTGG CGACCCGCTA TCACATGGGT GAGGAATTGA CTCAGGTGTT GCAATTATCA GCATTAGAGA CTGGTGAGTT ACGTCCACTC TATGAAGCGG CCAAGTTGCT ACATGGCTTA ATTCGTAACG GCGCTAAAAT TGTTCGTGGC ACTAAATCGC AATCAATAGA GTGTTTTGGT GATGCGCAAG CTTGGTTGCT TGAAGAGGCG AAGAAAGGTC GCCAAATCCA GCGCTTTAAG GGGTTGGGTG AAATGAATCC GGAGCAGTTA TGGGATACTA CGGTGAATCC GGACACTCGC CGTCTTTTGC AAGTTTGTAT TGAAGATGGG ATTGCTGCTG ACCAAATCTT CAGCACACTG ATGGGTGATG TGGTAGAGCC ACGCCGTGGC TTTATTGAGA ACAATGCATT AAAAGTGACT CGCTTGGATA TTTAA
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Protein sequence | MTEKQNTSLL SNGGIYDSSK ITVLRGLDAV RKRPGMYIGD VHDGTGLHHM VFEVVDNSVD EALAGHADSI LVKIHIDGSV SVSDNGRGIP VDIHKEEGVS AAEVILTVLH AGGKFDDNSY KVSGGLHGVG VSVVNALSER LWLDIWRDGY HYQQEYVLGE PQYPLKQLEV SAKRGTTLRF KPAKEIFSDV EFHYENLAKR LRELSFLNSG LKVSLIDERG EGRRDDFHYE GGIRSFVEHL AQLKTPLHPN VISVTGEHNG IVVDAALQWT DAYQETMYCF TNNIPQKDGG THLAGFRAAL TRTLGNYIEQ NGVARQAKIT FSGDDMREGM IAVLSVKVPE PSFSSQTKEK LVSSDVKPAV EATFGLRLEE FLQENPNEAR AIAGKIVDAA RAREAARKAR DLTRRKGVLD IAGLPGKLAD CQEKDPAMSE LFIVEGDSAG GSAKQGRNRK NQAVLPLRGK ILNVERARFD RMLSSAEVGT LITALGTGIG KDEYNPDKLR YHRVIIMTDA DVDGSHIRTL LLTFFYRQMP ELIERGHIYI GLPPLYKLKQ GKSELYLKDD IALNVYLANS AVEGAQLLPA EGEPPIEGLA LEKLLITYIA AKDTIVRHSH RYDSRLLEAL LEFTPLDSTC FQSYSDSEHL QSLMALLNQS SLGAPRYILK MQFPDEQHSA ALLATRYHMG EELTQVLQLS ALETGELRPL YEAAKLLHGL IRNGAKIVRG TKSQSIECFG DAQAWLLEEA KKGRQIQRFK GLGEMNPEQL WDTTVNPDTR RLLQVCIEDG IAADQIFSTL MGDVVEPRRG FIENNALKVT RLDI
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