Gene XfasM23_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXfasM23_0005 
SymbolgyrB 
ID6202192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylella fastidiosa M23 
KingdomBacteria 
Replicon accessionNC_010577 
Strand
Start bp4634 
End bp7078 
Gene Length2445 bp 
Protein Length814 aa 
Translation table11 
GC content47% 
IMG OID641701528 
ProductDNA gyrase subunit B 
Protein accessionYP_001828737 
Protein GI182680577 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAA AGCAGAATAC ATCGCTGCTC AGTAATGGCG GCATATATGA CTCAAGTAAA 
ATCACAGTAC TACGTGGACT GGATGCTGTT CGCAAGCGTC CAGGGATGTA TATCGGAGAT
GTCCATGACG GTACAGGTTT GCACCACATG GTGTTTGAAG TTGTCGATAA CTCGGTGGAT
GAGGCATTAG CTGGTCATGC CGACAGCATT CTTGTCAAGA TCCATATTGA TGGGTCTGTC
TCTGTTTCGG ATAACGGTCG AGGTATCCCT GTAGATATTC ATAAAGAAGA GGGTGTTTCT
GCCGCTGAAG TGATCCTGAC AGTTTTACAT GCTGGTGGTA AGTTCGACGA TAATAGCTAT
AAGGTTTCTG GTGGTTTGCA TGGGGTAGGA GTTTCAGTGG TCAACGCCCT TTCTGAGCGA
TTATGGCTTG ATATTTGGCG TGATGGTTAC CACTACCAAC AAGAATATGT TTTGGGTGAG
CCGCAATATC CTCTTAAGCA GTTAGAGGTG TCAGCGAAAC GCGGTACTAC ATTACGTTTT
AAACCGGCAA AAGAGATCTT CAGTGATGTG GAGTTTCATT ACGAAAATCT TGCAAAGCGC
CTCCGTGAGT TATCCTTCCT CAATTCCGGC CTTAAAGTTA GTTTGATTGA TGAACGTGGT
GAGGGTCGGC GTGACGATTT TCACTATGAA GGTGGTATTC GTAGCTTTGT AGAACATTTA
GCTCAATTGA AGACCCCATT GCATCCGAAT GTAATTTCGG TCACAGGGGA GCACAACGGC
ATTGTTGTGG ATGCTGCTTT ACAGTGGACT GATGCCTACC AAGAAACAAT GTATTGTTTT
ACAAATAACA TTCCACAAAA AGATGGCGGT ACCCACCTTG CTGGCTTCCG TGCTGCATTG
ACTCGTACGT TGGGTAATTA CATTGAGCAG AATGGGGTTG CTAGGCAAGC GAAGATCACT
TTTTCTGGTG ATGATATGCG TGAAGGTATG ATTGCCGTGT TATCGGTAAA AGTCCCTGAA
CCTAGTTTTT CTTCCCAAAC CAAGGAAAAG TTGGTGAGCT CCGATGTCAA GCCGGCAGTG
GAAGCTACCT TTGGCTTGCG TTTGGAGGAA TTCTTACAAG AGAATCCTAA CGAAGCACGT
GCAATTGCTG GAAAGATTGT CGATGCTGCT CGTGCTCGCG AGGCTGCTCG CAAAGCCCGC
GATTTAACCC GTCGAAAAGG TGTGCTTGAT ATCGCCGGTT TGCCAGGTAA GTTGGCAGAT
TGCCAAGAGA AAGACCCAGC GATGTCAGAA TTGTTTATCG TCGAAGGGGA TTCTGCTGGT
GGTTCTGCAA AGCAGGGGCG TAACCGAAAA AATCAGGCAG TATTGCCGCT CAGGGGCAAG
ATTCTTAACG TTGAACGTGC ACGATTCGAC CGTATGCTCT CTAGTGCTGA GGTTGGCACA
TTGATCACGG CCCTTGGGAC AGGCATCGGT AAGGACGAAT ATAACCCAGA TAAGCTACGT
TACCATCGCG TCATCATTAT GACCGATGCG GATGTGGATG GTTCGCATAT CCGTACTTTA
TTGCTGACGT TTTTTTACAG GCAAATGCCA GAATTGATTG AACGTGGCCA TATCTATATT
GGCTTGCCGC CCTTGTACAA GCTAAAGCAG GGTAAGAGTG AGCTGTACTT AAAGGACGAT
ATCGCATTGA ATGTTTATTT GGCGAATAGC GCGGTTGAAG GAGCGCAATT ACTCCCCGCT
GAAGGTGAGC CGCCCATTGA GGGTCTTGCA TTGGAGAAAT TGCTGATTAC ATATATCGCC
GCAAAAGATA CTATCGTGCG TCATTCGCAT CGCTATGATT CTCGCCTCCT GGAAGCACTG
CTTGAATTTA CTCCCTTGGA TTCGACTTGC TTTCAATCCT ACAGTGATAG CGAACATCTA
CAATCGCTGA TGGCATTGCT GAACCAGTCT AGCTTGGGTG CTCCGCGTTA TATTCTTAAG
ATGCAGTTTC CTGATGAACA ACATTCTGCC GCCTTGTTGG CGACCCGCTA TCACATGGGT
GAGGAATTGA CTCAGGTGTT GCAATTATCA GCATTAGAGA CTGGTGAGTT ACGTCCACTC
TATGAAGCGG CCAAGTTGCT ACATGGCTTA ATTCGTAACG GCGCTAAAAT TGTTCGTGGC
ACTAAATCGC AATCAATAGA GTGTTTTGGT GATGCGCAAG CTTGGTTGCT TGAAGAGGCG
AAGAAAGGTC GCCAAATCCA GCGCTTTAAG GGGTTGGGTG AAATGAATCC GGAGCAGTTA
TGGGATACTA CGGTGAATCC GGACACTCGC CGTCTTTTGC AAGTTTGTAT TGAAGATGGG
ATTGCTGCTG ACCAAATCTT CAGCACACTG ATGGGTGATG TGGTAGAGCC ACGCCGTGGC
TTTATTGAGA ACAATGCATT AAAAGTGACT CGCTTGGATA TTTAA
 
Protein sequence
MTEKQNTSLL SNGGIYDSSK ITVLRGLDAV RKRPGMYIGD VHDGTGLHHM VFEVVDNSVD 
EALAGHADSI LVKIHIDGSV SVSDNGRGIP VDIHKEEGVS AAEVILTVLH AGGKFDDNSY
KVSGGLHGVG VSVVNALSER LWLDIWRDGY HYQQEYVLGE PQYPLKQLEV SAKRGTTLRF
KPAKEIFSDV EFHYENLAKR LRELSFLNSG LKVSLIDERG EGRRDDFHYE GGIRSFVEHL
AQLKTPLHPN VISVTGEHNG IVVDAALQWT DAYQETMYCF TNNIPQKDGG THLAGFRAAL
TRTLGNYIEQ NGVARQAKIT FSGDDMREGM IAVLSVKVPE PSFSSQTKEK LVSSDVKPAV
EATFGLRLEE FLQENPNEAR AIAGKIVDAA RAREAARKAR DLTRRKGVLD IAGLPGKLAD
CQEKDPAMSE LFIVEGDSAG GSAKQGRNRK NQAVLPLRGK ILNVERARFD RMLSSAEVGT
LITALGTGIG KDEYNPDKLR YHRVIIMTDA DVDGSHIRTL LLTFFYRQMP ELIERGHIYI
GLPPLYKLKQ GKSELYLKDD IALNVYLANS AVEGAQLLPA EGEPPIEGLA LEKLLITYIA
AKDTIVRHSH RYDSRLLEAL LEFTPLDSTC FQSYSDSEHL QSLMALLNQS SLGAPRYILK
MQFPDEQHSA ALLATRYHMG EELTQVLQLS ALETGELRPL YEAAKLLHGL IRNGAKIVRG
TKSQSIECFG DAQAWLLEEA KKGRQIQRFK GLGEMNPEQL WDTTVNPDTR RLLQVCIEDG
IAADQIFSTL MGDVVEPRRG FIENNALKVT RLDI