| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_3338 |
|---|
| Symbol | |
|---|
| ID | 8650894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 3696841 |
|---|
| End bp | 3697803 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | Helix-turn-helix type 11 domain protein |
|---|
| Protein accession | YP_003327896 |
|---|
| Protein GI | 269958107 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGA CGTCGGCCCG TCTGCTCGCC CTCCTCGGGC TGCTCCAGTC CCGCGCCGAC
TGGTCCGGCC AGGAGCTCGC GCAGCGGCTG GGCGTCACCG ACCGGACGGT GCGCAACGAC
GTCGCCCGCC TGCGCGAGCT GGGCTACCCG GTCCACACCA CCCGCGGGCC CGGTGGCAGG
TACCGGCTGG GTGCGGGCGC CGTCCTCCCG CCGCTCCTGC TCGACGACGA GGAGGCGGTC
GCGATCGCCG TCGGCCTTCG TGCCACGACG GGCATGAAGG CGTTCGAGGA GAGCGGCGGC
CGGGCGCTCA CCAAGCTCGA GCAGGTCATG CCGCAACGGA TCCGGCGACG GATCGAGGCG
CTGCGGTCCG CGACGAGCGC AGGCCCCGTC AACACCGACT CCAACGTCGA GGATCCCGTC
GTCGAGCCCG AGCTCCTGAC CGAGATCTCC GCCGCGATCC GGGACCGCCG CACGCTGCGC
TGCGACTACG AGCAGCGCAC GGTGGAGGTC GAGCCGTACC ACCTGGTGGT GTGGCAGCGG
CGCTGGTACC TGGTCTGTCG CGACGTCGCC TCCGGTCGTT GGGAGCCCTT GCGGGTGGAC
TGGATCCGCC TTCGGACTCC CGGCGGACGC CGGTTCTCCC CGGCCCCGCC ACCCGAGGAC
GTCACGGAGT TCGTGGTCCG GGAGGTGGCG GGTGCCGGGT GGGCCGTGCA CGCACGGATC
GTCGTCGACG CACCCCCGGA CGAGGTGGCC GCGCGCATCA ACCCCGCCGT CGGGCGGGTC
GAGCCGCACG ACGACGGCCG CAGCGTCCTG GTGACCGGCG GGGACACCCT GGAGACCGTC
GCCGTGTGGA TCGGCATGCT CGGACTCGAC TTCGCGGTGG AAGAGCCGCC CGAGCTCGTC
GACCACCTGC GCGGGCTCGC CGAGCGGTAC GCGCGGGCGG TCGAACGGTC CGCAGGGCCC
TGA
|
|---|
| Protein sequence | MTTTSARLLA LLGLLQSRAD WSGQELAQRL GVTDRTVRND VARLRELGYP VHTTRGPGGR
YRLGAGAVLP PLLLDDEEAV AIAVGLRATT GMKAFEESGG RALTKLEQVM PQRIRRRIEA
LRSATSAGPV NTDSNVEDPV VEPELLTEIS AAIRDRRTLR CDYEQRTVEV EPYHLVVWQR
RWYLVCRDVA SGRWEPLRVD WIRLRTPGGR RFSPAPPPED VTEFVVREVA GAGWAVHARI
VVDAPPDEVA ARINPAVGRV EPHDDGRSVL VTGGDTLETV AVWIGMLGLD FAVEEPPELV
DHLRGLAERY ARAVERSAGP
|
|---|
| |