| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_3150 |
|---|
| Symbol | |
|---|
| ID | 8650703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 3489131 |
|---|
| End bp | 3490003 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003327709 |
|---|
| Protein GI | 269957920 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCC CGTCCCGCCC TCTGCCCGAC GCCGCGGCGG TCGGGCCGGA GCGGCGCCCC
GGCGTCCACC CGCAGCTCGT CATCGGCGCG GTGCTGGTGC TCGCCGTCGT CGTCGTCGCG
CTCGTCTCCC TGGTGTGGAC GCCGTACGAC CCCATCCACG CCGTGCCCGC GAACCGGCTC
CAGGGCCCGA GCGCCGAGCA CTGGTTCGGC ACCGACCGGT TCGGGCGGGA CGTGCTCTCG
CAGATCATGG TCGGCGCGCG GCTGACGCTC TACGTCGGCG TGGTCGCGGT GGGCATCGCG
GCGCTGGTCG GCGTTCCGGT CGGCATCGTC GCGGGGATGC GCGGCGGCGT GCCCGGCACC
CTGCTCATGC GCGGCGCCGA CGTGCTGCTC GCGTTCCCCG GCCTGCTGCT CGCGATCATC
CTCGGCGCGG CGTTCGGGGC CGGGACGACG ACGGCGATGG TCGCCCTCGG GATCGGCGCC
ATCCCGGCCT TCGCGCGCGT GGCCCGGTCG GGGACGCTGC AGGTGATGCG CACCGACTAC
GTGCAGGCGG CTCGCGCGGC GAACCGGTCG GCGTGGGCGA TCGCGTGGCG GCACGTGCTG
CCCAACATCG CCGGGATCGT CGTCGTGCAG TGCTCCGTGA ACTTCGGCCT CGCGGTGCTC
GCGGAGGCCG CGCTGTCGTT CCTCGGGCTC GGTACGGCCC CGCCTACGCC GTCGTGGGGG
CGCATGCTGC AGGAGTCGCA GCAGTTCCTC GGCGTCTACG ACCACCTCGC GATCGCGCCG
GGCGTCGCCG TCGCCGTCGC GGTGCTGGGG TTCAACCTGC TGGGCGACGG CCTGCGCGAC
GTCATGGACC CGCGCCTCAA GGGGGTGCGC TGA
|
|---|
| Protein sequence | MSVPSRPLPD AAAVGPERRP GVHPQLVIGA VLVLAVVVVA LVSLVWTPYD PIHAVPANRL
QGPSAEHWFG TDRFGRDVLS QIMVGARLTL YVGVVAVGIA ALVGVPVGIV AGMRGGVPGT
LLMRGADVLL AFPGLLLAII LGAAFGAGTT TAMVALGIGA IPAFARVARS GTLQVMRTDY
VQAARAANRS AWAIAWRHVL PNIAGIVVVQ CSVNFGLAVL AEAALSFLGL GTAPPTPSWG
RMLQESQQFL GVYDHLAIAP GVAVAVAVLG FNLLGDGLRD VMDPRLKGVR
|
|---|
| |