Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_2872 |
Symbol | |
ID | 8650419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 3191125 |
End bp | 3194754 |
Gene Length | 3630 bp |
Protein Length | 1209 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | CRISPR-associated helicase Cas3, Anaes-subtype |
Protein accession | YP_003327443 |
Protein GI | 269957654 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.286079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTCC CCACTTTCAC CGACTTCTTC ACCGAGGTCC ACCATGTCGA GCCCTACCCG TGGCAGGCGG CGCTCGCTGA CCGGGTGGTC GCTGAACGGC GGTGGCCCGA CCGCGTCGAC ATCCCGACGG GACTCGGCAA GACCGCCTGC ATCGACCTCG CCCTGTGGGA CCTGGCACGC CAGGTGCAGG CGCGAACCAC CGGCGGCCAC ACGCGGACCG CACCTCTGCG CGTCGTCCAC GTCGTCGACC GACGCTCGAT CATCGACCAG ACCGGGAGGC ACCTCGGCGA GCTGAGCGCG GCGCTCGCGG GCGGAGCTTC CGGCACGGCG GCCGGGGCGG TCCGTCAAGC CCTGGCTGGG TTCGGGATCC GCACCAGTGA CCAGGACGAG CTCGACCCCG TGGTCTCGTT CGAGACCCTG CACGCGCACA CGCCTGACGG CGAGGCGTGG CTGCGAGGCC ACCGACCCGC CGTCGTCTCG ACGACGCCAC ACCAGTTCGT CTCTCGACTG CTGTTCCGCG GCTTCGGCGT CAGCGAGGGC ATGGCTCCGG TCCACGCCGC CCTCACCGGT ATCGACCGGC TGGTGCTTTT CGACGAGCCT CACCTGTCCG ACCCGGCGAT CCAGACGATC CTCTCCCAGC AGGAGCTCCA GGCCCAAGCG GGCCCCGTGG GAGACGTCCC GCTCGGGCAG CTCGTCCTCC TCGGGGCCTC GCTTCCCCCG CACCGGCGAG ATCAGGGGAG TGCGCACGGG ATCAGCGACG CTGACCGGTC CCACGAACAC GCGGGGAAGC TCTTGGGCGC TCCACGCCGG CTCGTCGTCA ACCCGACCAA GGACACCGAC AAGGACATCC GCTCCGCTCT GGTCACGACG GCACAGGCCG CCGCCGGCAA GGTGCTGGTG TTCTGCAACA CCGTCCGGAT GGCTCAGGAC GTTCACGCCG ACCTGGAGCG CGCAGCATCA GGCAGCGCGC TCCTGGTCAC CTCACGGTTC CGTCCCGCGG ACCGCACACG GCTCGACAGT GCGATCGTCA CCTGGGAGAA CGACGAGGAC GGGCCGCGGT TCGTCGTCGC CACCCAGACG CTCGAAGCCG GCGTCGACGT CTCAGCGGGA ACCGTCGTCA CCGAGCCGTG CCCCTGGCCG GCGCTGCAGC AGCGCGTCGG CCGCGTCAAC CGGCGCGGCG AGCATGAGAC CGCGTCCGTC CACGTCATGA CGGGGATCCG TGCCGGGACC CGCGCGGTCT ACGACGCGAG CGCCGTCGAA CGGACCCTGG ACCTGCTCGA CGGCGTGACC AGCCTGAGCC TGCAGGACCA GGCGCGACTC GACACGGACA CCGGGTGGGA GGCGCCGGTC CCTGCCGTCA CGCTCCACGC CGGACTGCTG CCCGTGCTGG CACAGACCCG CCCGCGTCCG GTCACCGACA TCGACCCGGT CCCGTACGTC GTCGGACGTC GCGAGGACGC GCCCACCGCC GATGTGCGAG TGGCCTGGCG GACGGTGGTG GGGGGCGACG CACTCACAGC CTGCCCGCCT CAGTCCGACG AGGTGATCGA GGTGCCGGTG ACGGCGGCCC GCACGCTGCT CCGGGCCGCG CATCACGGCG AATACAAGGC GCCAGACTTC GGCGACGCGG CACTGGCGTC CGACCGAGAG GTGCGGACAC CGTTCCGACG CGACGACGCA CTGCCCCCCG CCATGATCCT CAGGGGCCAG GGGAGGGGCA CCCGTGGGTT GCGTGACGGC GCATCGGGCA GCAGCGAAGC CTGGGCCACG ATCCTTCGTC CGGAGGACAT CACGCCCGGC AGCCTCGTCG TCTTCCCGGT GAGCTACGGC GGCTACACCG CCGCGCGGGG CTGGGATCCG TCGTCTCGCG CCAAGGTTCC TGATCTTGCC GGAGCGAACC TCGCGAAGGG CGGACCGTTC TGGCTGACCA CGGACACCGC CGACGTCCTG GCTCCCGTTC TGACTCCGGG GGCGGGGACC GCGGTTGTTG ATGCGCTCCA GGAGATCGAA CGGATCGCCG AGCAGGACCC GCTCGTCGAG CCGGCACTCG ACGAGCTTGA GTCTGCCCTC GCGGACGGGC TCGGAACGGT GGTCTTGGTG ACACCCGCGC CGCACGCCTA CGTCGTCGAG CGCGCTCCCG CGGGGAAGCT GGCCCGTACG CGAGCATCGT TCGTCGCCCT TGATGACCAC GCCCGCGATG TCGCGCACCG TGCCAGGGTC CTCGGCGAGA GCCTCGGCCT GAACGATGAG CTCCTCGCTG CCGTCGAGCA TGCCGGGTAC CACCACGACG GCGGAAAGAG CGTGGACCAC TTCCAGCGGT ACCTCTGCAG CCACGGTCAT ACGTCGCACG AGCACCCTCT GCTGGCGAAG TCCGGTGGCG AAGGCCGCCC GCGAGCGGTC CTCGAGCGCT CCGCGCGGCA AGCGGGCGTG CCACGCGGCT TCCGGCACGA AGCCGTCTCT GCTGCGCGGA CGCTCGACCG CTTCGGCGAC CTGTGCGTCC ACCTTGTCTC TGCGCACCAC GGCTACAGCA GGCCGCTCAT CCTCCCGGTC GAGGACCCGA CGCATCCGGG GCGTGACGCC AACGCTCTTG CTGGTGCCGC GGAGCGCTTC GCGCACCTCA ACGAACGGTA CGGGCCATGG GGGTTGGCGC ACCTGGAGTC GATCGTCCGC CTTGCCGACC ACAGTGCGTC CGCTGCTCCG AAACACGATG CGCCTGAACC CGTGACGGCA CCGCCGCTGC GGACGGAGTC GATGCCCGTA CTCGCTCAGG CGGACATTGT CCTCGAAGGG CTCGCATTCG ACTCGCCGCT GACCTGGTGG GCCGCGTTCG GGGCCCTCGT CGCAGCGACC GCACTCGATG CCGGTGCGAC GATCCGATGG GAGGCCCGGG CCGGGCAACA GGTTCCGGTC CTGTGCACGA CTGCGTCGCT GGACGAGGTT GCCGCGGAGC TGGCAACGAC CCCAGAGATC GTGAGGGAAG CCGAGGGCCT GGTGCCGTCG CTCCGCACGA AGCACCAGAA GATCCCGGTG GCGAGCGTGA CCACCGCGTT GTCGAGGATC GACCGCAAGC GACCAGGTCA CCGACTTGTC GGGGCAGTCG TGTCCGACGT CGTCGCCGAG AACGGAAGCG TCAGGCTGAA CGTCCCGTTC GAGGCTGCAA ACTCCAACGG CTTCTCCACC GGGCTCGACG CGCTCGCGAG GTGGAAGGGT GGTCCCGTCG ACGCGATGCT CTCCGTGCTG ACCACCCGCG ACGATCCACG CCAGTACAGC GACGGCACGA TCCACGGACT TGCCGAGAAC CAGGCCAACC GTGCACAGCT CGACGGGCTG GGCGACGGAA GGCAGGCGCG GGTGCGTGCG ATCGTTCTCG TCGCGGTCGT CTACGGCCTT CAGGAGTCAT CCTGCAACGG GAAGTCTTCC CTCGGTGTTG ACGGCAGATA CATGCGACTT CCTGTGACGT CGACCGGGGT CACGCTTCCG CGCCTCGTCG CAGAGCTCAG GACGGTCCCG CGACGTCCGA GGCTGGCGTG GAACGCGGCC GGAGTCTCCG CGCTTGCCGA GTATGAGCGG CGACCGGTTG ACAAGTACTT CTCCACGTAC GCCGCAACCA CCGGAGTCAC CTATGGCTGA
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Protein sequence | MSFPTFTDFF TEVHHVEPYP WQAALADRVV AERRWPDRVD IPTGLGKTAC IDLALWDLAR QVQARTTGGH TRTAPLRVVH VVDRRSIIDQ TGRHLGELSA ALAGGASGTA AGAVRQALAG FGIRTSDQDE LDPVVSFETL HAHTPDGEAW LRGHRPAVVS TTPHQFVSRL LFRGFGVSEG MAPVHAALTG IDRLVLFDEP HLSDPAIQTI LSQQELQAQA GPVGDVPLGQ LVLLGASLPP HRRDQGSAHG ISDADRSHEH AGKLLGAPRR LVVNPTKDTD KDIRSALVTT AQAAAGKVLV FCNTVRMAQD VHADLERAAS GSALLVTSRF RPADRTRLDS AIVTWENDED GPRFVVATQT LEAGVDVSAG TVVTEPCPWP ALQQRVGRVN RRGEHETASV HVMTGIRAGT RAVYDASAVE RTLDLLDGVT SLSLQDQARL DTDTGWEAPV PAVTLHAGLL PVLAQTRPRP VTDIDPVPYV VGRREDAPTA DVRVAWRTVV GGDALTACPP QSDEVIEVPV TAARTLLRAA HHGEYKAPDF GDAALASDRE VRTPFRRDDA LPPAMILRGQ GRGTRGLRDG ASGSSEAWAT ILRPEDITPG SLVVFPVSYG GYTAARGWDP SSRAKVPDLA GANLAKGGPF WLTTDTADVL APVLTPGAGT AVVDALQEIE RIAEQDPLVE PALDELESAL ADGLGTVVLV TPAPHAYVVE RAPAGKLART RASFVALDDH ARDVAHRARV LGESLGLNDE LLAAVEHAGY HHDGGKSVDH FQRYLCSHGH TSHEHPLLAK SGGEGRPRAV LERSARQAGV PRGFRHEAVS AARTLDRFGD LCVHLVSAHH GYSRPLILPV EDPTHPGRDA NALAGAAERF AHLNERYGPW GLAHLESIVR LADHSASAAP KHDAPEPVTA PPLRTESMPV LAQADIVLEG LAFDSPLTWW AAFGALVAAT ALDAGATIRW EARAGQQVPV LCTTASLDEV AAELATTPEI VREAEGLVPS LRTKHQKIPV ASVTTALSRI DRKRPGHRLV GAVVSDVVAE NGSVRLNVPF EAANSNGFST GLDALARWKG GPVDAMLSVL TTRDDPRQYS DGTIHGLAEN QANRAQLDGL GDGRQARVRA IVLVAVVYGL QESSCNGKSS LGVDGRYMRL PVTSTGVTLP RLVAELRTVP RRPRLAWNAA GVSALAEYER RPVDKYFSTY AATTGVTYG
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