| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2861 |
|---|
| Symbol | |
|---|
| ID | 8650408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 3178283 |
|---|
| End bp | 3180145 |
|---|
| Gene Length | 1863 bp |
|---|
| Protein Length | 620 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | N-acyl-D-glucosamine 2-epimerase |
|---|
| Protein accession | YP_003327432 |
|---|
| Protein GI | 269957643 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACTACT CCTTCTCTGA CTCCATCGGC GGCTACGTCC AGTCCTTCGA CCGGGACGCC
GGCTCGTTCG TGCTCACCAC GAGCGACGGC CGCGACGTGA CGATCAAGCT CACGCCCACC
CTCTACGCGA AGATGCTCCG CAACCTGGGC GAGCCGTGGT TCGACACCAC GGCGGCGACG
CCTGAGATGC TCACCCCCGG CCGGTTCCTG TTCGCCTACG GGACGTACTA CCCGGACGTC
CCGGGCGTGC TGGAGGCCCA GCACATCGAC TTCGTCGGCC GCGACGCGGC GCGCTGGCGG
TTCGAGGAGC CCGACTGGTG GATCAAGCAG GCCAAGTCCA TCGCCGAGTT CTTCGTCCGG
GCCCAGTTCG ACGTCGACGG CGACAAGGTC AAGATCGACT ACAGCACGTA CCGCACCAAC
CTGTCCCTCA GCGGTCAGCG GCTCGCCAGC TTCCGGCAGG AGACGGACAC CATCTCCCGC
CTGGTCTACG GCTTCGCGAG CACCTACCTG CTCACGGGCG AGGACGTGTT CCTCGAGGCG
GCCGAGGCGG GCTCGACGTA CCTGCGCGAC CACATGCGCT TCTACGACAC GGACGAGGAC
GTGGCGTACT GGTACCACGG CATCGACGTG CACGGCACCC GCGAGACCAA GGTGTTCGCC
TCGGAGTTCG GTGACGACTA CGACGCGGTG CCCATGTACG AGCAGATCTA CGCGCTCGCC
GGCCCCACGC AGACCTACCG CATCACCGGC GACCCGGCGA TCCGCAAGGA CATCGACCTG
ACGCTCGGCC TGTTCGAGCG GTTCTTCAAG GACCACGACA AGGGCGGCTA CTACTCGCAC
GTCGACCCCA TCAGCCTGAG CCCGCACGCC GAGTCGCTGG GCAAGAACAA GGCCAAGAAG
AACTGGAACT CGGTGGGCGA CCACGCCCCC GCGTACCTGA TCAACCTGTG GCTGGCCACG
GGCGCCGAGG AGCACAAGGA GTTCCTCAAG TACACCGCCG ACTGCATCGC CGACCACTTC
CCCGACTACG AGCACAGCCC CTTCGTCAAC GAGCGTTTCT TCGACGACTG GAGCCGGGAC
CTCACGTGGG ACTGGCAGCA GAACCGGGCC GTGGTGGGGC ACAACCTCAA GATCGCGTGG
AACCTCATGC GCATCCACTC GATCGCGCCC GAGCCCCGGT ACGTGGAGCT GGCGGAGAAG
ATCGCCGACC TCATGCCGGA GTACGGCATG GACGCCCAGC GAGGCGGCTG GTACGACGTC
GTCGAGCGGG AGATCCCCGA GGGCGAGACG CAGCCACGCT TCGTGTGGCA CGACCGCAAG
GCGTGGTGGC AGCAGGAGCA GGGCATCCTC GCCTACGAGA TCCTCTACGG GATCCTCGGC
AAGCCGGAGT ACCTCAAGTA CGCCCGCGAG TCTGCCGCGT TCTACAGCAA CTACTTCCTC
GACCACGAGG ACGGCGCGGT CTACTTCAAC GTGCTGGCCA ACGGGCTCCC GTACGCGCTG
GGCACCGAGC GGCAGAAGGG CAGCCACTCG ATGAGCGGCT ACCACTCCAT CGAGCTCGCC
TACCTCGCGC AGACGTACAC CAACCTGCTG GCCACCGGGA AGCCGCTGGA CCTGCACTTC
AAGCCGCTGC CGGGCGGGTT CCCCGACGGC ATCCTGCGGG TCTCGCCGGA CATCCTGCCC
ACCGGCAGCG TGAAGATCGC GGCCGTCACC GTCGACGGCG AGCCGTGGAC CGCCTACGAC
TCCCACGACC TGACGGTCAC GCTGCCGCAG GTCAGCCACC GCCCGAAGAT CAAGGTCACC
CTCGAGCCGA CCGCCGCGCA GAACACGGCG GCGCAGAACA CCGCCGCGCA GAACGGAGCC
TGA
|
|---|
| Protein sequence | MHYSFSDSIG GYVQSFDRDA GSFVLTTSDG RDVTIKLTPT LYAKMLRNLG EPWFDTTAAT
PEMLTPGRFL FAYGTYYPDV PGVLEAQHID FVGRDAARWR FEEPDWWIKQ AKSIAEFFVR
AQFDVDGDKV KIDYSTYRTN LSLSGQRLAS FRQETDTISR LVYGFASTYL LTGEDVFLEA
AEAGSTYLRD HMRFYDTDED VAYWYHGIDV HGTRETKVFA SEFGDDYDAV PMYEQIYALA
GPTQTYRITG DPAIRKDIDL TLGLFERFFK DHDKGGYYSH VDPISLSPHA ESLGKNKAKK
NWNSVGDHAP AYLINLWLAT GAEEHKEFLK YTADCIADHF PDYEHSPFVN ERFFDDWSRD
LTWDWQQNRA VVGHNLKIAW NLMRIHSIAP EPRYVELAEK IADLMPEYGM DAQRGGWYDV
VEREIPEGET QPRFVWHDRK AWWQQEQGIL AYEILYGILG KPEYLKYARE SAAFYSNYFL
DHEDGAVYFN VLANGLPYAL GTERQKGSHS MSGYHSIELA YLAQTYTNLL ATGKPLDLHF
KPLPGGFPDG ILRVSPDILP TGSVKIAAVT VDGEPWTAYD SHDLTVTLPQ VSHRPKIKVT
LEPTAAQNTA AQNTAAQNGA
|
|---|
| |