Gene Xcel_2475 details

Gene Information

• Locus tag: Xcel_2475
• ID: 8650018
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: +
• Start bp: 2699667
• End bp: 2700212
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 73%
• Product: RNA polymerase, sigma-24 subunit, ECF subfamily
• Protein accession: YP_003327048
• Protein GI: 269957259

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0299411
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCCCAG CGACGCTCAC CCCCGACGAG GAGTTCGCCG CCTTCATGGT CGAGGCCTCG 
CCGCGGCTCG CGCACACCGC GTGGCTCCTC ACCGGTGACG AGCACCTCGC CGAGGAGCTC 
GTCCAGGAAG CCCTGACCCG CACCTTCCTC GCCTGGAACA AGGTGCGCAC GCGCGACCCG 
CACGCCTACG CCCGCCGCGT GCTGGTCGGA CGCCGCACGA ACGACCGGGT CAAGCGCGAC 
CGCGAACCGT CCTATGCGCT CCCGGCGCTG CCCGACGACG CGACCGAGGG CGGCGAGCGC 
GCCGTCATCG AGCGCGACCG CCTGGTGCGC GCGCTGGCGA CCCTCACCCC GCGGCAGCGA 
CGCATCGTCG TGCTGCGTCA CCTCGTCGGG CTGAGCGAGC AGGAGGTCGC GCACGACCTC 
GGTGTCTCGC TCGGCACCAT CAAGTCGACC GCGTCCCGCG GCCTCGCCCA GCTCCGCCAG 
GTGCTCGAGT CCGCCGACGA CGCCCCACCC CAGCCCGGTA CCGAACGATC CGGCACGGAG 
AGATAA 

 

Protein sequence

MTPATLTPDE EFAAFMVEAS PRLAHTAWLL TGDEHLAEEL VQEALTRTFL AWNKVRTRDP 
HAYARRVLVG RRTNDRVKRD REPSYALPAL PDDATEGGER AVIERDRLVR ALATLTPRQR 
RIVVLRHLVG LSEQEVAHDL GVSLGTIKST ASRGLAQLRQ VLESADDAPP QPGTERSGTE 
R