Gene Xcel_2462 details

Gene Information

• Locus tag: Xcel_2462
• ID: 8650004
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: -
• Start bp: 2684610
• End bp: 2686634
• Gene Length: 2025 bp
• Protein Length: 674 aa
• Translation table: 11
• GC content: 72%
• Product: transcription termination factor Rho
• Protein accession: YP_003327035
• Protein GI: 269957246

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.683247
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACTGACA CCACCGACAC CCGGGGAACC GGGTCCCTGA GCTCGATGAA GCTCGCCGAG 
CTCCAGGCCG TGGCCACCCA GATGGGGGTC AAGGGCACGT CCCGGATGCG CAAGGGCGAC 
CTCGTCGAGG TCATCCGTGC GGGTCGCAGC GGCGGCAGTG CGGCTGCTGC TGCACCCGTC 
GCCGCGGCAC AGACCGCCGC ATCGGCCGTG CGCGCCGAGG TCCCCGAGGG GGCCGCGGCC 
GCGGGCACGC AGCGCCGGTC CCGCCGGGCG ACCCGCCCGA CGGGCGCGGA CGCCACAGAA 
CAGCCCGCGC GTGAAGAGCG CGTCGAGGCG CCCAACGAGC GGCCCGAGCG CCAGGATCGT 
GCTGAGCGCC AGGATCGTGC TGAGCGCCAG GATCGTGCTG AGCGCCCGGA CCGTGCCGAG 
CGACCTGACC GGGCCGAGCG CGGCTCCCGC ACCGAGCGTG CCGACCGCGC CGAGCAGGCC 
GGCGACCCCG ACCGCGCGGC GCGGCTCGAA GCCCTCGCCG ACGCCGTCGC CGCACCGCGG 
CAGCGGCGCC AGGGCGGCGG GAACCAGGGC CAGCAGGGCA ACCAGCAGGG CCAGCAGGGC 
GGCCAGCACC GCTCCGACGG CGAGGGCCAG CGCTCCGCCG ACGGCGGCCA GCAGCAGCGC 
CAGCAGGGCA ACCGCCAGAA CGACAACCGC CAGAACGACA ACCGCCAGAA CGACTTCGGC 
GACGAGGGCG GCTCGCGCCG TCGTCGGGGC CGGGACCGTG GCCGCGACCG CAAGCGCGGC 
CGCAACCAGC GCGGCGGGCA GGTCGACATC GTCGGCGGCG AGGACGTCGA GGTGCGCGAG 
GACGACGTGC TGCTGCCCGT CGCGGGCGTG CTCGACATCC TCGACAACTA CGCGTTCATC 
CGCACCAGCG GCTACCTGCC GGGTGCGAAC GACATCTACG TCTCGCTCAA CCAGGTCAAG 
CGGTCCGGCC TGCGCCGCGG TGACGCCGTC ATCGGCGCGA TCCGCCAGCC GCGCGAGGGC 
GACCCGCAGC CGCAGGGCAA CAGCGCGCGG GCCAAGTTCA ACGCGCTCGT CCGGCTCGAC 
TCGATCAACG GCATGTCGCC GGAGGAGGCG CGCCAGCGCC CCGAGTTCAA CAAGCTGACG 
CCGCTGTACC CGCAGGAGCG GCTGCGCCTG GAGAACCCCG AGGCCACCAA GCTCACGCCG 
CGCGTGATCG ACATCGTCGC CCCGATCGGC AAGGGCCAGC GCGGCCTCAT CGTCGCGCCG 
CCCAAGGCGG GCAAGACGAT CATCATGCAG CAGATCGCGA ACTCGATCAC CGCGAACAAC 
CCCGAGGTCC ACCTCATGGT GGTGCTCGTG GACGAGCGGC CCGAAGAGGT CACGGACATG 
GAGCGGTCGG TCAAGGGCGA GGTCATCGCC TCGACGTTCG ACCGCCCCGC GTCCGACCAC 
ACGATCGTCG CCGAGCTCGC CATCGAGCGC GCCAAGCGCC TCGTGGAGCT GGGCCAGGAC 
GTCGTGGTGC TGCTCGACTC GATCACCCGT CTGGGCAGGG CCTACAACCT GGCCGCGCCG 
GCGTCGGGCC GCATCCTGTC CGGTGGTGTG GACGCCGCGG CGCTCTACCC GCCGAAGAAG 
TTCTTCGGTG CGGCGCGCAA CATCGAGAAC GGCGGCTCGC TGACCATCCT CGCCTCGGCG 
CTCGTGGAGA CCGGGTCGAA GATGGACGAG GTCATCTTCG AGGAGTTCAA GGGCACCGGA 
AACATGGAGC TGCGCCTGTC CCGCAACCTC GCGGACAAGC GCATCTTCCC GGCCGTGGAC 
GTCAACGCCT CGGGCACGCG CCGCGAGGAG ATCCTCATGG CCCGTGACGA GCTGCAGATC 
GTCTACAAGC TGCGCCGCCT GCTCGGTGCG CTCGACACGC AGCAGTCGAT CGAGCTGCTG 
CTCGGGCAGC TCAAGAAGAC GAAGACGAAC GTCGAGTTCC TGCTCCACGT CCAGAAGACG 
ACGCCGGGCA GCCTCCAGGA CGAGAACGCC GGCGAGACGA TCTAG 

 

Protein sequence

MTDTTDTRGT GSLSSMKLAE LQAVATQMGV KGTSRMRKGD LVEVIRAGRS GGSAAAAAPV 
AAAQTAASAV RAEVPEGAAA AGTQRRSRRA TRPTGADATE QPAREERVEA PNERPERQDR 
AERQDRAERQ DRAERPDRAE RPDRAERGSR TERADRAEQA GDPDRAARLE ALADAVAAPR 
QRRQGGGNQG QQGNQQGQQG GQHRSDGEGQ RSADGGQQQR QQGNRQNDNR QNDNRQNDFG 
DEGGSRRRRG RDRGRDRKRG RNQRGGQVDI VGGEDVEVRE DDVLLPVAGV LDILDNYAFI 
RTSGYLPGAN DIYVSLNQVK RSGLRRGDAV IGAIRQPREG DPQPQGNSAR AKFNALVRLD 
SINGMSPEEA RQRPEFNKLT PLYPQERLRL ENPEATKLTP RVIDIVAPIG KGQRGLIVAP 
PKAGKTIIMQ QIANSITANN PEVHLMVVLV DERPEEVTDM ERSVKGEVIA STFDRPASDH 
TIVAELAIER AKRLVELGQD VVVLLDSITR LGRAYNLAAP ASGRILSGGV DAAALYPPKK 
FFGAARNIEN GGSLTILASA LVETGSKMDE VIFEEFKGTG NMELRLSRNL ADKRIFPAVD 
VNASGTRREE ILMARDELQI VYKLRRLLGA LDTQQSIELL LGQLKKTKTN VEFLLHVQKT 
TPGSLQDENA GETI