| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2323 |
|---|
| Symbol | |
|---|
| ID | 8649859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 2517212 |
|---|
| End bp | 2521312 |
|---|
| Gene Length | 4101 bp |
|---|
| Protein Length | 1366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003326898 |
|---|
| Protein GI | 269957109 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.771882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCG GCACCCCGCC CCGCCGCCCC CGCGCACGCA CCGCCACCGA GCAGCATCGG
GCATGGCTCG AGCTCGTCGA CCGCGATGGG CCCTTCCTCG CGATCCCGGC GCTCAAGCGA
GTGTGGCCGC AGGGGATCGG GTCGATCTCC GACGATGCAA GAGACTCCCT CCGCGACGCA
AAGCCGGACT TCGACCGCGC CTGGGACGCG TGGCTCAATC GACCCGACTC CGACGAGGTG
CTGGAGCAGT ACCGCGGCGC CCGCGACAAG TGGGTGCACT CGGTGCTCCA GGACGTTGCC
GGGTGGGGCA AGTTCCTGAC GTGGGAGGCC GCCGCGCTGC CCGGCGGGAC GCCGCGCGCC
GCGTCCCCCA GCCGCGCGGT GACGGTCGAG GCGACGGGCG CCTTCGTTCG TAAGGACGAC
GTCGCAGCGC TCGTGTTCGT TATCGATCCC GTCGCGTCTC TGCGCGACCC GTCCGACGAC
CTGTGGTCCG CCAGCGCGAT CGACCGAATG GACGCGATGC TGCGCTCATC CGGGCACAGG
ATCGGCATCG TCACCGATGG GCGATGGTGG GGCGTGGTTT CCGCGCAGCC CGAGACAATG
ACGGCGTCTG GCGTCGTTGA CGCGCAGACG TGGATCGAGG AAAGCGACGT CCGCGACGCG
TTCTTCGCGC TGATCGACCC GTTGCGGCTT GCCGGTGGTA AGGAGTGCGA CCGCCTCGCT
GCGCTGTTCG CGGAGTCCGT GACCGCGGCG GAAGAGATCA CCGTCGCGCT TGGCACCCAG
GTACGCCGAG CAGTGGAGCT TCTCGTGTCG GCGTTCTCGG AGTCGGCGCT CGCGGCGAGC
GAGCAAGGGC ACGACGACCC GCTGCCGGCC AACCGCGACC TTGTCTACGA GGGTGCTGTC
ACCGCAATGA TGCGCGTCGT CTTCCTCCTC TTCGCCGAAG AGCGCTCGAT GATGCCGCAG
TCCGCCCTCT TCACGGAGGG CTACGGCGTC AGCGGCGAGC TCGACAAGCT CGACGCGCGC
GCCCGTGAAG AGGGGTCTGA AGCCCTCGAT GGCACGCACC ACGCCTGGCA CCGGCTCCTC
GCGACCACTC AGGCGCTCTA CTCCGGCGTG ACCAGCGAAG ACATGCGATT GCCCGCATAC
GGGGGCTCGC TGTTCGACGC CGAACGGTTC CCGTTCCTCA CCGCGCGCGA CGAGCGCGGC
GCGCTAAGCG TCGCCGTGAG CGACCGCGTG ATGCTCGAGG TGCTGCGTGC CGTCCAGTAC
GCCGCGGTGC GCGGCGAGAA CCGCCGCATC TCGTTCCGCG ACGTCGACGT CGAGCAGATC
GGCTACATCT ACGAGGGCCT GCTCGGCTAC ACCGCGCGCG ACGTCGACAT GGTGACGGTT
GGTCTCATCG GCAAGGAGGG TGAGGAACCG GAGATCCCGC TCGACACGCT CGACGACCTG
TACGAGGCGG CTCTCGATGA CGCCGACTTC GCCGCGGCTC TCGTCAAGTG GGTCAAGGAG
AACCAGTCGG CGGCCACCGG GAGGACCGCG GCAGCGATCA AGAAGGCGCT TGCGCCGCAG
AACGCTCCGG ACGATGCCGA GCGCGCTCTC CTCGCGGTCG CACCAGGCGA CGCCAACCTT
CGGGAGCACC TGCGCGGATA CATCGGCATC ATCCGGCGCG ACCTTCGCAA CAGGCCGGTC
GTGATCCGCC CGGGCGGCCT CGCAGTGGTC GAGACGCCGT CACGGGCGAA CTCAGGCGCG
CACTACACGC CGAAGTCGCT CGCACGGGAA GTGGTGCTGA ACGCGCTCGA GCCGCTCGTC
TACCAGCCGG GTCCGCACCA GACCGCCGAC CAGAGCCAGT GGAAGTTGCT CAGCTCGACC
GAGCTCCTCA ACCTCAACGT CGCCGACATC GCATGTGGTT CCGGGGCGTT CCTCGTCGCG
GCCGCTGAGT ATCTCGCTGA GCGACTGGTC GAGGCCTGGC ATGCGGAAGG CGTCGTGTCG
GGTTCGGCGC ATGAACTGAG CATCAGTGCT CGCCGATACG TCGTGGCGAA CTGTCTCTAT
GGTGCCGACA TCAACGGCAT GGCCGTCGAG ATGTGCAAGC TCTCACTCTG GCTCGTCTCG
CTTGACCCGG CGCTGCCGTT TAGCTTCGTC GATGACAGGG TGCTGCACGG AAACTCGCTA
CTCGGCATAA CCAACACCAA GCAACTCGAG GCGCTGCACA TCGACCCAAG TCGGGCAAAG
ACGTTCCAGT CCGAGCGGGC TGCCGCACAG CGATACTCGA CTGGAACCCT GTTCGGAGAA
GGCTCTGAGG CGCTTGGCAT TGAGATGCTC GATGTGCGAG GCGTGCTGCG GCGGGCCATC
GATCTGCGGC GTCGGCTCGC CGATCCGGTT GCGGAAAGCG ATCCGCAGCG GTCCACGGCC
GCAAAGCGAC GGCTTTGGCG CGACTACCAG GCCCTAACAG CAACGCTCTC TCATGTCGCG
GACGGGGTGA TTGCTTCGGG CCTGGCCCTT AGCGGTAAGC CCGGCCGCGC GCTGGACGAA
GCATTCGAAA CGCTGCGCAT CGGGGTCGAC CGCGCGTACG CGCACGGGGG AGCGATGGAC
CCGACCATGC TCTCCGGAAC TGTCGTCGCT GGGTTGACAC CAACAGTCCG CACTGACCAT
CTTCAATGGA AGCCGCTTCA TTGGGTACTC GCAGTACCTG ACGTCATGGA GCGTGGTGGG
TTCGATGCAA TCATCGGAAA CCCGCCGTTT CTCGGTGGCA AGAAGATATC AGGTTCAAGC
GGCAAGAACT TTCGGGAGTT CCTGGTTAAC ACAATTGCCG GCGGCCGTGC GGGCGAGGCC
GACCTGGTTG CGTATTTCCT ATTGCGGGCC GTCGAGCTTC TTGCGCCTAA TGGGTGTCTC
GGATTGATCG CCTCGGAGTC GATTGGCGAG GGTGAGAGTA GGCGAGTAGC CCTCGATCAT
CTTGTTGGCG ACTCCTTCAC ACTGTATCGA GCCGACAAGC GACGGAAGTG GCCAACCGAG
GCATCGGTTC ACGTGTCCGT ACTCTGGGCG ACCAAGTCCG CTGGATTCAC GGGGGAACGT
TGCCTCGACG GAGCGATCGT TGAAGGAATC ACTTCAAGCC TTGAGCGGAT CACACGAGTC
TCTGGTACGC CGCTGCGGCT TCTGGAGAAC CAGGGCCTAA GCTTCATGGG ATCCATCCTG
TCAGGGAAGG GCTTCATCCT CTCTGGCGCA GAGCGGAGTG CGCTAATCGC ACGGGATCCG
TTGAGTGAAC CGGTCATCCG CCCGATGTTC ACTGCTAAGG AAGTGAATGA GTACTCCGAT
GTGACTCCTG TGAACTGGGT TATTGACTTT GAGGCGATGT CGCTCGGTGA GGCAATGTCC
TTTCCGGGTG CATTCGCACG GGTCGAACGG TTGGTGAAGC CCGTGCGCGA GAAGGTAAAG
AAGAAGCAGT ACAGAGATCG CTGGTGGTTG TTCGCGGAGC GGGGAAGGAA CCTGTACAAG
CAGCTATCCC GGATAGATCA CGCGCTTGGG ATCGTACTCA CAAGCGACAC CATGATGCCT
GCGCGGTTGC CAACTACCGG CATTATTACG AATTCTATCG GCGTAATCTG CCTTCCGTCG
TTTGCTCATC TCGCGGTCCT CTCATCGAGC GTTCATCAGG TCTGGGCGAT GCGGTGGGGT
TCGAGCCTCG ATGCGGCGAC GCGCTACACG ACATCGGATG TATTCGAGAC GTTCCCGCTT
CCAGTTGTGA CTCCAAACCT TGAGACTCTC GGCGAGACGC TCGATCTCGA AAGGCGAGAG
ATAATGCGGC GGCGAGGTCT CGGACTGACC TCTCTGTACA AGCTTGTCAA TAGCCAATCT
GACCGGAGTG ACGCTGACGT AGTGCGGCTT CGGCATGTCC ATGCCGAGAT CAGTGACGAA
GTGTTGGCTG CGTACGGATG GGACGATATT CGCGCAGACC ATGGCTTCCA CACGTATCGC
AACATGGAGC GCTGGACCGT TAATTCAGCG GTGCGTGTCG AGATCCTCGA TCGCCTACTC
GAGGAGAACC ATCGCCGGGG CGCAGCGCAG GCGATTGGGC CTGCCGGGGA TTCGGTCGAC
GAGGACGGTG ATGAAGAGTG A
|
|---|
| Protein sequence | MTRGTPPRRP RARTATEQHR AWLELVDRDG PFLAIPALKR VWPQGIGSIS DDARDSLRDA
KPDFDRAWDA WLNRPDSDEV LEQYRGARDK WVHSVLQDVA GWGKFLTWEA AALPGGTPRA
ASPSRAVTVE ATGAFVRKDD VAALVFVIDP VASLRDPSDD LWSASAIDRM DAMLRSSGHR
IGIVTDGRWW GVVSAQPETM TASGVVDAQT WIEESDVRDA FFALIDPLRL AGGKECDRLA
ALFAESVTAA EEITVALGTQ VRRAVELLVS AFSESALAAS EQGHDDPLPA NRDLVYEGAV
TAMMRVVFLL FAEERSMMPQ SALFTEGYGV SGELDKLDAR AREEGSEALD GTHHAWHRLL
ATTQALYSGV TSEDMRLPAY GGSLFDAERF PFLTARDERG ALSVAVSDRV MLEVLRAVQY
AAVRGENRRI SFRDVDVEQI GYIYEGLLGY TARDVDMVTV GLIGKEGEEP EIPLDTLDDL
YEAALDDADF AAALVKWVKE NQSAATGRTA AAIKKALAPQ NAPDDAERAL LAVAPGDANL
REHLRGYIGI IRRDLRNRPV VIRPGGLAVV ETPSRANSGA HYTPKSLARE VVLNALEPLV
YQPGPHQTAD QSQWKLLSST ELLNLNVADI ACGSGAFLVA AAEYLAERLV EAWHAEGVVS
GSAHELSISA RRYVVANCLY GADINGMAVE MCKLSLWLVS LDPALPFSFV DDRVLHGNSL
LGITNTKQLE ALHIDPSRAK TFQSERAAAQ RYSTGTLFGE GSEALGIEML DVRGVLRRAI
DLRRRLADPV AESDPQRSTA AKRRLWRDYQ ALTATLSHVA DGVIASGLAL SGKPGRALDE
AFETLRIGVD RAYAHGGAMD PTMLSGTVVA GLTPTVRTDH LQWKPLHWVL AVPDVMERGG
FDAIIGNPPF LGGKKISGSS GKNFREFLVN TIAGGRAGEA DLVAYFLLRA VELLAPNGCL
GLIASESIGE GESRRVALDH LVGDSFTLYR ADKRRKWPTE ASVHVSVLWA TKSAGFTGER
CLDGAIVEGI TSSLERITRV SGTPLRLLEN QGLSFMGSIL SGKGFILSGA ERSALIARDP
LSEPVIRPMF TAKEVNEYSD VTPVNWVIDF EAMSLGEAMS FPGAFARVER LVKPVREKVK
KKQYRDRWWL FAERGRNLYK QLSRIDHALG IVLTSDTMMP ARLPTTGIIT NSIGVICLPS
FAHLAVLSSS VHQVWAMRWG SSLDAATRYT TSDVFETFPL PVVTPNLETL GETLDLERRE
IMRRRGLGLT SLYKLVNSQS DRSDADVVRL RHVHAEISDE VLAAYGWDDI RADHGFHTYR
NMERWTVNSA VRVEILDRLL EENHRRGAAQ AIGPAGDSVD EDGDEE
|
|---|
| |