| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_2301 |
|---|
| Symbol | |
|---|
| ID | 8649837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 2488392 |
|---|
| End bp | 2489948 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003326877 |
|---|
| Protein GI | 269957088 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.298617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCC TGTCGGTCCT GGACAAGAGC CGGGCGGTCG CGCCGCGTGA CTTCAACCGT
TGGCTGATCC CGCCGGCCGC CCTGGCGGTG CACCTGGCGA TCGGTGAGGT CTACGCGTTC
AGCGTCTTCA AGACCGCCCT GGTCGATCGA TTCGACGCCA GCCTCACCCA GATCGGCGTC
GTCTTCTCCA TCGCGATCGG CATGCTCGGC CTGTCGGCGG CGTTCGGCGG AACGTGGGTC
GAGAAGGCCG GACCACGCAA GGCGATGGTC CTGGCCGCAC TCTGCTGGGG CACGGGCTTC
GTGATCGGGT CCATCGGCGT GGCCACCAAC CAGCTCTGGC TGCTCTACCT CGGGTACGGC
GGCATCGGCG GCATCGGCCT CGGCATCGGG TACGTGTCGC CCGTCTCCAC GCTCATCAAG
TGGTTCCCCG ACCGGCCCGG CATGGCGACC GGCCTGGCGA TCATGGGCTT CGGCGGCGGC
GCCCTCATCG CGTCCCCGCT GACGAGCCTG CTCCTGGAGT CCCTCGCGCC CAACCCCGTC
GACGCGATCA TCCCGGCCCT GCTCATCATC GCTGCGATCG ACGTCGTCGT CATGCTCGCC
GGGGCGGCCA CGATCCGCAC CCCGCACCCG GACTGGAAGC CGAACGGCTG GACCCCACCC
GCCGCACCGC GGTCCGCGCT GATCTGCACC GGCAACGTCA CCGCACGCAA CGCGATCCGC
ACCCCGCAGT TCTGGCTGCT GTGGGTGGTG CTGTTCTGCA ACATCACCGC GGGCATCGGC
ATCCTCGAGC AGGCCGCGCC GATGGTCCAG GACTTCTTCC CCGGCACCGC CGCGGCCGTC
GCCGCCGGGT TCGTGGGCGT GCTGTCCCTG TGCAACATGG GCGGCCGTTT CGGCTGGTCG
ACGTTCTCCG ACGTCGTCGG GCGCAAGCGG ATGTACATGG TGTACCTGGG CTTCGGCGCG
ATCGCCTACC TGGCGCTGTC CCAGGTAGGC ACGTCGTCCA TCGGGCTGTT CGTGCTGTTC
GCCGCGATCA TCCTGAGCTT CTACGGCGGC GGCTTCGCCA CCATCCCCGC CTACCTCAAG
GACATGTTCG GCGGTCTGCA GGTCAGCGCC ATCCACGGAC GCCTGCTCAC CGCATGGTCC
GCGGCCGGCA TCGCCGGCCC GCTGATCGTC AACTCCATCG CCGACCACCA GAAGGCCGCC
GGCCGCGAGG GTGCCGAGCT GTACTCGATG TCGCTGCTCG TCATGGCGGG GCTGCTGTGC
GTCGGCTTCG TCGCGAACCT GCTCGTGCGC CCGGTCGCCC AGCGCTGGCA CGAACCGGTA
CCGACGACGG CGATGGCCGA CGTGGCGCTC GCGGGTGCGG TGGCGCCCAC GGCACCGGGT
GGTGGCGCTG TCGCGACTCT CTCGCGGACC CGGGTCGCCG CGCCGACGAC GCCGCAGGGT
CTCGTGGGCC GGGCGGGCGC GGGCGTGCTG CCTCGCGTGC TGTGGGTCGT GGTCGTCGGA
GGGCTCGGCT ACGGCCTGGT CATGACCGTG ATCAAGGCGA TCGCGCTGTT CTCCTGA
|
|---|
| Protein sequence | MSILSVLDKS RAVAPRDFNR WLIPPAALAV HLAIGEVYAF SVFKTALVDR FDASLTQIGV
VFSIAIGMLG LSAAFGGTWV EKAGPRKAMV LAALCWGTGF VIGSIGVATN QLWLLYLGYG
GIGGIGLGIG YVSPVSTLIK WFPDRPGMAT GLAIMGFGGG ALIASPLTSL LLESLAPNPV
DAIIPALLII AAIDVVVMLA GAATIRTPHP DWKPNGWTPP AAPRSALICT GNVTARNAIR
TPQFWLLWVV LFCNITAGIG ILEQAAPMVQ DFFPGTAAAV AAGFVGVLSL CNMGGRFGWS
TFSDVVGRKR MYMVYLGFGA IAYLALSQVG TSSIGLFVLF AAIILSFYGG GFATIPAYLK
DMFGGLQVSA IHGRLLTAWS AAGIAGPLIV NSIADHQKAA GREGAELYSM SLLVMAGLLC
VGFVANLLVR PVAQRWHEPV PTTAMADVAL AGAVAPTAPG GGAVATLSRT RVAAPTTPQG
LVGRAGAGVL PRVLWVVVVG GLGYGLVMTV IKAIALFS
|
|---|
| |