Gene Xcel_2261 details

Gene Information

• Locus tag: Xcel_2261
• ID: 8649797
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: +
• Start bp: 2442342
• End bp: 2444357
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 71%
• Product: choline/carnitine/betaine transporter
• Protein accession: YP_003326837
• Protein GI: 269957048

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGGCA CGACGACGTC CTCGGACTCC GGCGGAGAGC CCCACCACAC GAACGGAGCG 
AGCCGGCACC GGACCGCACG CCTCCTGCAC GAGGTGTCGC TCCCCCAGAT CGCCGAAGGT 
CTCCACCCGG CGCTGCTGCC CGGCATCAGC GTCGAGGACA ACGACCACCG CTTCGGCGTC 
AACAAGGCCG TCCTCGGCAT CGCGTTCGGC CTCGTCGTCG GCGTCATCGC CTGGGGCGTC 
CTCGCCGCCG ACAGCCTCCA CGACGCCTCC GAGGTCGCGT TCGCCGTCGT GACCGAGGAC 
TTCGGCTGGT TCTTCGGGGT GCTGATGCTC GCCGTCTTCG GCTTCATGAT GTGGCTCGGC 
TTCGGCCGCT ACCGCAGCAT CCGCCTCGGG CAGGACGGCG AGCAGCCCGA GTTCTCCACG 
GCCTCCTGGG TCGCCATGAT CTTCGCCGCG GGCATCGGCA TCGGCCTGCT CTTCTACGGC 
CCGCTCGAGC CGACGACCCA CTTCACCGCG CTCCCACCCA CCTTCGAGGG CGTCGAGCCC 
GGCAGCGACC AGGCGATGCA CCTCTCCCTC GCCCAGACCA TGTTCCACTG GGGGCCCATC 
GCCTGGAGCA TCTACGCGCT GGTGGGCGGC GCCGTCGCCT ACGCGTCCTT CCGCAAGGGG 
CGCGCGCCGC TCATGTCCGC GCTCCTCGAA CCCATCTTCG GTGCGCGCAC CCGCGGCCCG 
CTCGGCGCCT TCGTCGACAT CTTCGCCATC ATCGTGACCT TGTTCGGCAC CGCCGTCTCG 
CTCGGCATCG GCACCCTGCA GATCGGGCGT GGCGTCGAGA TCGTCGCCGG CATCGGACCG 
CTCGGCAACG CCGCCCTGGT CGGCATCATC GCGCTGCTCG GCGTCGCGTT CGTGGTCTCG 
GCCGTCTCCG GGGTCAAGCG CGGCATCCGC GTCCTGTCGA ACGTCAACAT GGTCCTCACG 
GGCGCGATCG CCCTCTTCGT CTTCGTCGCC GGACCCACCG TGCTGCTGCT CAACCTGCTC 
CCGGGCGCTC TGATGACGTT CCTCGGCGAG TTCCCGGCGC TCGCCGCACA GTCCGGCGCC 
ACGAGCGAGG ACGCCCAGTC CTTCATGAGC GGCTGGACCA CCTACTACTG GGCCTGGTGG 
GTCTCCTGGA CCCCGTTCGT GGGCCTGTTC ATCGCCAAGA TCAGCCGCGG CCGCACGCTG 
CGCGAGTTCG TGCTCACCGT GATCATCGTC CCCACCCTCG TCTGCCTCGT CTGGTTCACG 
GTGCTCGGCG GCACGAGCAT GTGGCTGGAG CAGGCGGGCG CGGCGATGAC CGACTCCGAG 
TCCGGCCAGG ACATGCTCTT CGCCCTCCTG GACAACCTCC CGGCCGGGGT GGTGACCTCC 
GCGATCGCCA TGGTCTGCGT GGGCATCTTC TTCGTCACCA GCGCCGACTC CGCCTCGATC 
GTGATGGCGT CCCTCGCCGA GAAGGGCAAC CCGGCCCCCC GCCGGTGGAA CACGATCGTG 
TGGGGCTCGG CGCTCGCCGT CATCGCCGCG GTGCTGCTGG TCGGTGGCGG GAGCGCCGCC 
CTCAGCGGCC TGCAGAACCT CATGATGGTG ACCGCGCTGC CCTTCGCGTT CATCATCGTG 
CTCGTCATGG TGGCCTGGTC CAAGGAGTTG GCCCGCGACC CGCAGACCAT CCGCCGCCGG 
TTCGCCCGCG TGGCGCTGGC GCGCGGCGTG CGCGAAGGCA TCGAGCAGCA CGGGGACGAC 
TTCGTCGTCG GCGTCGTCAA GGCCCACCCC GAGAAGGGAG CCGGCGCCTG GCTGGACACG 
GACGATCCAG GGCTCACCGC GTGGTACTCC CCCGGGTCCG GGAGCGCCGG CGCGCAGCTC 
GACGACGGGA CGCTGCTCGC CGAGGCCAGG AACGACGAGA GCCGGGCCGA CGAAGATCCC 
GCCGTCGACC CGTCTGTCGT CCCCGTCGAC CCGTCTCCCG TCCCCCCGGC CGGGTCACCG 
GACCGGCCCG GCCCGGACGC CCCGGGCACG GCCTGA 

 

Protein sequence

MTGTTTSSDS GGEPHHTNGA SRHRTARLLH EVSLPQIAEG LHPALLPGIS VEDNDHRFGV 
NKAVLGIAFG LVVGVIAWGV LAADSLHDAS EVAFAVVTED FGWFFGVLML AVFGFMMWLG 
FGRYRSIRLG QDGEQPEFST ASWVAMIFAA GIGIGLLFYG PLEPTTHFTA LPPTFEGVEP 
GSDQAMHLSL AQTMFHWGPI AWSIYALVGG AVAYASFRKG RAPLMSALLE PIFGARTRGP 
LGAFVDIFAI IVTLFGTAVS LGIGTLQIGR GVEIVAGIGP LGNAALVGII ALLGVAFVVS 
AVSGVKRGIR VLSNVNMVLT GAIALFVFVA GPTVLLLNLL PGALMTFLGE FPALAAQSGA 
TSEDAQSFMS GWTTYYWAWW VSWTPFVGLF IAKISRGRTL REFVLTVIIV PTLVCLVWFT 
VLGGTSMWLE QAGAAMTDSE SGQDMLFALL DNLPAGVVTS AIAMVCVGIF FVTSADSASI 
VMASLAEKGN PAPRRWNTIV WGSALAVIAA VLLVGGGSAA LSGLQNLMMV TALPFAFIIV 
LVMVAWSKEL ARDPQTIRRR FARVALARGV REGIEQHGDD FVVGVVKAHP EKGAGAWLDT 
DDPGLTAWYS PGSGSAGAQL DDGTLLAEAR NDESRADEDP AVDPSVVPVD PSPVPPAGSP 
DRPGPDAPGT A