Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_2233 |
Symbol | |
ID | 8649767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 2411221 |
End bp | 2413797 |
Gene Length | 2577 bp |
Protein Length | 858 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | DNA polymerase LigD, polymerase domain protein |
Protein accession | YP_003326809 |
Protein GI | 269957020 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGCGCAC CGACGACGGT CACCGTGGAC GGGCACCGCC TCCAGCTCAC GAACCTGGAC AAGGTGCTCT ATCCGGCCAC GGGCACCACC AAGGGCGAGG TGATCGACTA TCTCGCCCGG ATCGCACCCG TCCTGCTCCC CCACGCCCGG CGGCGTCCCG CGACGCGCAA GCGGTGGCCC GACGGCGTCG AGGGCCAGGT GTTCTTCCAG AAGAACGCCG ACCGCTCCAC GCCGTCGTGG GTGCGCACGC ACCGCATCCA GCACAAGACG TCGGCCAACG ACTACGTGCT GGTCGACGAC GTCGCCACGC TCACCTGGCT GGGGCAGACG GCGTCGCTCG AGCTGCACGT GCCGCAGTGG CAGGTCGGGC GCACCGGCAC CCACCTGCCG CCGGACCGGC TGGTGCTCGA CCTGGACCCC GGCGAGGGCG CGGGCCTGCC CGAGTGCGCG GAGGTCGCGC GGCTGGCCCG GGCGATCCTC CAGGGGATGG GGCTGGAGCC GCTGCCGGTG ACCTCCGGGT CGAAGGGCAT CCACCTGTAC GCCGCACTGT CCGCCGGGTC CTCCCCCGAG GGGGCGAAGC CGTCCTCCGC GGAGCAGATC ACCGACGTCG CGCACGAGCT CGCCCGGTAC CTGGAGGCCG AGCACCCCGA CCTGGTGGTC AGCGACATGA AGAAGTCGCT GCGCGGCGGC AAGGTGCTCG TGGACTGGTC GCAGAACAAC GGGGCGAAGA CGACGATCGC GCCCTACTCG CTGCGCGGGC GCACCCGTCC CACGGTCGCG GCACCGCGCA CCTGGGCGGA GCTCGACGAC CCGGACCTGC GGCAGCTCTC GTACGAGGAG GTGCTGGACC GGGTGGCCCG CGACGGCGAC CTGCTGGCCG GGCTGACGGC GGGTCACCTG TCCCAGCTCG AGCCGACCCC GGCGCACCTG GCCCGGTTCG AGCGCCTGGC CACCTACAAC GCCAAGCGGG ACCCCGCCAG GACCCCGGAA CCCTTCGACA CCGCCCCACC CGCTCCGGTG GTTGAGCCTG TCGAAACCAC GCCACCGGTG GGAGGGGTTT CGACAGGCTC AACCACCGGG GTGGGCTCAA CCATCGGGGT GGGCTCGACC ACCGGGGTGG GCGCGCCCAC CTTCGTGATC CAGGAGCACC ACGCCCGCCG CCTGCACTGG GACTTCCGCC TCGAGCGCGA CGGGGTGCTG GTGAGCTGGG CGCTGCCCAA GGGCGAGCCG ACCGACCCCG GCACGAACCA CCTGGCCGTG CAGACCGAGG ACCACCCGCT CGCGTACGGC GGCTTCGAGG GCACCATCCC GAACGGCGAG TACGGGGCGG GCGAGGTGAC CATCTGGGAC TCCGGCACGT ACGAGACCGA GAAGTGGCGC GACGGCAAGG AGGTCATCGC CGTCCTGCAC AGCGAGCGCC GCGGCACCCG CCGCCTCGCA CTGATCCGCA CGGGCCGCGC GGAGGGCGAC AACCAGTGGC TGATCCACCG CACGAAGGCC CAGCCCGCCG AGGACGTGGC TTCGCCGGCC CCGGTGGTTG AGCCTGTCGA AACCACCACC CCGACCCGCT CGACCGCCGA GGTCGCGGTC CGGCTCGAAC CCATGCTCGC CTCCGCCGCC CAGCCGGCCG AGGTCCGCGC CCTGGAGGCC GACGGGGAGT CGGGCAGCCA CGACTGGGTG TTCGAGATGA AGTGGGACGG CTACCGCACC CTCGCCGTCG TCGAACCCGG CCCCGACGGC ACGCGCGCCA TCCGTCTCAC CTCCCGCACG GGACAGGACT TCACGCGCAC CTACCCGGAG CTGGCGCCGC TCGCCGCGCA GGTCACCGGC GAGCTGCCGG TGGTCCTGGA CGCCGAGATC GTCGCCCTCG ACGCCGCAGG CCGCCCCGAC TTCCGCCGGC TGCAGCAGCA CGCGGGCAAC GTCGAGCTCA TGGTCTTCGA CGTGCTCCAG GTGGGCGACC GGTCCCTGCT GCACACCCCG TACGACGAGC GCCGAACCGT GCTGGCCGAC GTCCTCGACG CACGACGTCC GGTCCACCTG CCCGCCGCGT TCGACGGCGA CCTGACCGCC GCGCTGGAGA CCTCGCGACG CCTGCGCCTC GAGGGCGTCA TGGCCAAGCG CCGTGAGTCG ACCTACCAGC CGGGCCGCCG GACGCGGCAG TGGCTCAAGC TCAAGCACAC CGCCGTCCAG GAGGTGGTCG TCGTCGGGTG GCGTCCGCTG CGCGCGGGAG AAACCGACGA GGACCCGCGG TATGCGGGCG GCCTGCTGCT CGCCGTACCC GCCGACGACG GCGCCCTGCG CTACGTGGGC CGCGTCGGGA CGGGGTTCAG CGACGCCGAA CGCCGCGACG TCGCCACCCG CCTCGCCGCC GTCGAACGCA AGACGCCGCC GCTCGACGGC GTCCCCCGGC CCGACGCCGC TCACACCCGC TGGGTCACCC CGCGGCTGGT CGGCGAGGTG GAGTTCGCGG AATGGACCGG CGACCCGACC GACGACCCCG AGGCCCGGTT GCGCGCCGCC CGCTGGCGCG GCTGGCGCCC GGACAAGGAG CCCGCCGACG TCGTCGTCGA ACCCTGA
|
Protein sequence | MGAPTTVTVD GHRLQLTNLD KVLYPATGTT KGEVIDYLAR IAPVLLPHAR RRPATRKRWP DGVEGQVFFQ KNADRSTPSW VRTHRIQHKT SANDYVLVDD VATLTWLGQT ASLELHVPQW QVGRTGTHLP PDRLVLDLDP GEGAGLPECA EVARLARAIL QGMGLEPLPV TSGSKGIHLY AALSAGSSPE GAKPSSAEQI TDVAHELARY LEAEHPDLVV SDMKKSLRGG KVLVDWSQNN GAKTTIAPYS LRGRTRPTVA APRTWAELDD PDLRQLSYEE VLDRVARDGD LLAGLTAGHL SQLEPTPAHL ARFERLATYN AKRDPARTPE PFDTAPPAPV VEPVETTPPV GGVSTGSTTG VGSTIGVGST TGVGAPTFVI QEHHARRLHW DFRLERDGVL VSWALPKGEP TDPGTNHLAV QTEDHPLAYG GFEGTIPNGE YGAGEVTIWD SGTYETEKWR DGKEVIAVLH SERRGTRRLA LIRTGRAEGD NQWLIHRTKA QPAEDVASPA PVVEPVETTT PTRSTAEVAV RLEPMLASAA QPAEVRALEA DGESGSHDWV FEMKWDGYRT LAVVEPGPDG TRAIRLTSRT GQDFTRTYPE LAPLAAQVTG ELPVVLDAEI VALDAAGRPD FRRLQQHAGN VELMVFDVLQ VGDRSLLHTP YDERRTVLAD VLDARRPVHL PAAFDGDLTA ALETSRRLRL EGVMAKRRES TYQPGRRTRQ WLKLKHTAVQ EVVVVGWRPL RAGETDEDPR YAGGLLLAVP ADDGALRYVG RVGTGFSDAE RRDVATRLAA VERKTPPLDG VPRPDAAHTR WVTPRLVGEV EFAEWTGDPT DDPEARLRAA RWRGWRPDKE PADVVVEP
|
| |