Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_2214 |
Symbol | |
ID | 8649748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 2383556 |
End bp | 2385496 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | Succinate dehydrogenase |
Protein accession | YP_003326790 |
Protein GI | 269957001 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGAGA CCGAACGGCA CGCGTACGAC GTCATCGTCA TCGGTGCGGG CGGTGCCGGG CTGCGCGCGG CGATCGCGGC ACGCGAGCGC GGGCTGCGCA CGGCGATCGT CTGCAAGTCG CTGTTCGGCA AGGCGCACAC CGTGATGGCC GAGGGCGGGT GCGCGGCAGC GATGGGCAAC GTCGCCGAGA AGGACTCGTG GCAGGTGCAC TTCCGGGACA CCATGCGCGG CGGCAAGTTC CTCAACAACT GGCGGATGGC GGAGCTGCAC GCCCAGGAGG CCCCCGACCG CGTCTGGGAG CTGGAGAGCT GGGGCGCGCT GTTCGACCGC ACGCCGGACG GCCGCATCAG CCAGCGCAAC TTCGGCGGGC ACACGTACCC GCGGCTCGCG CACGTCGGCG ACCGCACCGG GCTCGAGATC CTGCGCACGC TCCAGCAGCG CGTCGTCGCG CTGCAGCAGG CCGACCACGC GGAGACGGGC GACTACGAGG CGCGGCTGCG CGTGTTCGCC GAGTGCACGG TCACCGAGCT GCTGACCGAC GACGACGGGG CCGTCGCGGG CGCGTTCGGC TACTGGCGGG AGTCGGGCCG CTTCCTGGTG TTCGAGGCGC CCGCCGTCGT GCTGGCCACG GGCGGCATCG GCAAGTCGTT CCAGGTGACG TCGAACTCGT GGGAGTACAC GGGCGACGGG CACGGCCTCG CGCTGCGGGC CGGGGCGAGC CTCGTCGACA TGGAGTTCGT GCAGTTCCAC CCCACGGGCA TGGTGTGGCC GCCGAGCGTC AAGGGCATCC TCGTCACCGA GAGCGTGCGC GGCGACGGCG GCGTGCTGAA GAACTCGGCC GGCGAGCGGT TCATGTTCGA CTACGTCCCG GACGTGTTCC GCGACCTGTA CGCCGAGTCC GCGCAGGAGG CGGACCGCTG GTACGACGAC CAGGAGAACA ACCGCCGCAC CCCCGACCTG CTTCCCCGCG ACGAGGTGGC CCGCGCCATC AACACCGAGG TCAAGGAGGG GCGCGGCTCC CCGCACGGCG GCGTGTACCT CGACGTCGCG AGCCGCCTGC CGGCCGACCA GATCCGGCGC CGACTGCCCT CGATGTACCA CCAGTTCAAG GAGCTGGCGG GCGTCGACAT CACGGCCGAG GCGATGGAGG TCGGCCCCAC GTGCCACTAC GTGATGGGCG GGATCGACGT CGACCCCGAC ACCGCTCGGT CGAGCGTGCC GGGGCTGTTC GCCGCCGGAG AGTGCGCGGG CGGGATGCAC GGCTCGAACC GCCTGGGCGG GAACTCCCTG TCCGACCTGC TGGTCTTCGG CCGCCGCGCC GGGCTCGGAG CGGCGGACTA CGTCGAGGGC CTCGACCGCC GCCCCACGAT CCGGGACGAC GACGTCGACG CCGGTGCCGC GACGGCGGTC GCACCGTTCG ACCCGCCCGC CGACGGGACC ACCGGCGAGA ACCCGTACAC CCTGCACGCC GATCTGCAGC GGATCATGAA CGACCTGGTG GGCATCATCC GCACCGAGGC CGAGATGATC GCCGCCCTCG GCCGCCTCGA CGAGCTGCGC GGACGGCTGC GCCACGTCGT CGTCGAGGGG CACCGCAACT ACAACCCGGG CTGGCACCTG GCGCTCGACC TGCGCAACAT GCTCATGGTC AGCGAGGCCG TCGCGGCGTC GGCGCTCGCC CGCACCGAGA GCCGCGGCGG CCACACCCGC GACGACTACC CCACCCTCGA CCCCGACTGG CGGCACCGGG TGCTCACGAC CCGCTGCGCG CCCGCAAGCA CCGACGACGA CGGCGCCGAC CCCGTGCCCC GCGTCGTCGT CGAACCGGGC GAACGCACCC CGATGCGACC CGACCTGCTG GACCTGTTCG AGCTCACCGA GCTCGAGAAG TACTACACGC CGGCCGAGCT GGCCGGGCAC TCCCGGGGAG GAACCCCATG A
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Protein sequence | MTETERHAYD VIVIGAGGAG LRAAIAARER GLRTAIVCKS LFGKAHTVMA EGGCAAAMGN VAEKDSWQVH FRDTMRGGKF LNNWRMAELH AQEAPDRVWE LESWGALFDR TPDGRISQRN FGGHTYPRLA HVGDRTGLEI LRTLQQRVVA LQQADHAETG DYEARLRVFA ECTVTELLTD DDGAVAGAFG YWRESGRFLV FEAPAVVLAT GGIGKSFQVT SNSWEYTGDG HGLALRAGAS LVDMEFVQFH PTGMVWPPSV KGILVTESVR GDGGVLKNSA GERFMFDYVP DVFRDLYAES AQEADRWYDD QENNRRTPDL LPRDEVARAI NTEVKEGRGS PHGGVYLDVA SRLPADQIRR RLPSMYHQFK ELAGVDITAE AMEVGPTCHY VMGGIDVDPD TARSSVPGLF AAGECAGGMH GSNRLGGNSL SDLLVFGRRA GLGAADYVEG LDRRPTIRDD DVDAGAATAV APFDPPADGT TGENPYTLHA DLQRIMNDLV GIIRTEAEMI AALGRLDELR GRLRHVVVEG HRNYNPGWHL ALDLRNMLMV SEAVAASALA RTESRGGHTR DDYPTLDPDW RHRVLTTRCA PASTDDDGAD PVPRVVVEPG ERTPMRPDLL DLFELTELEK YYTPAELAGH SRGGTP
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