Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_2089 |
Symbol | |
ID | 8649620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 2240657 |
End bp | 2241340 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003326665 |
Protein GI | 269956876 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0760206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCACAC GTGCCCCACG CAGCCTGCGC GTCGTCGTCG CCGGCGGCCA CGGCCAGATC GCGCTGCTGC TCACCCGCAC CCTGACCGAC CGGGGGCACG ACGTCGTCGG CATCGTCCGC AACCCTGACC ACGTCGCCGA CGTCGAGGCC GTGGGCGGCT CCGCCGTCGT CCAGGACCTG GAGGCGTCCG ACGTCGTCGC GGTGGCCGAG GTGCTGACCG GAGCGGACGC CGTCGTCTTC GCGGCCGGCG CGGGGCCGGG CAGCACCGCG GAGCGCAAGT ACACCGTCGA CCGTGACGCG TCGATCCTGC TCGCCGCGGC CGCCGAACAG GCGGGGGTCA AGCGGTTCGT GCAGGTCTCG ACCAGCCGGG CTGGCTCCCC CGCGGCGACG GGGTCCACGC CGGTGTGGGT CGCGTACATC GACGCGAAGA CGCAGGCCGA GGACGCGCTC AAGGCGACGA ACCTGGACTG GACGATCCTG CGCGCGGGCG CGCTGACGAA CGGCCCGGGC ACCGGACGGG TCACCCTCGC GGGGCGCCAC GTGCCGCGCG GCACCGTCCC GCGAGCCGAC GTCGCGACCG TGCTCGCGGA GCTCGTCGTC TCCGGCGCCG CGGTGCGCCG CACCCTGGAG CTGACGACGG GCCACGTCCC GATCGCGACC GCGGTGGCGG CGACGGCCCA GTAG
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Protein sequence | MPTRAPRSLR VVVAGGHGQI ALLLTRTLTD RGHDVVGIVR NPDHVADVEA VGGSAVVQDL EASDVVAVAE VLTGADAVVF AAGAGPGSTA ERKYTVDRDA SILLAAAAEQ AGVKRFVQVS TSRAGSPAAT GSTPVWVAYI DAKTQAEDAL KATNLDWTIL RAGALTNGPG TGRVTLAGRH VPRGTVPRAD VATVLAELVV SGAAVRRTLE LTTGHVPIAT AVAATAQ
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