Gene Xcel_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_1340 
Symbol 
ID8648861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp1460574 
End bp1461620 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content76% 
IMG OID 
Producthemolysin A 
Protein accessionYP_003325929 
Protein GI269956140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGCCGG CGAGGGTCGA CGCCGAGCTC GTGCGCCGCG GTCTGGCGCG CTCGCGCGCG 
CACGCCGCCG AACTGGTGAA GGCGGGGCGG GTCTCGGCCG AGGGGCGGTC CGTCTCCAAG
CCGTCGGTGG TCGTTCCCGA CGACGCCGCA ATCGACGTCG TCCCTGATCC CGCGGACCCG
GGGTACGCGT CGCGGGCCGC GCTCAAGCTC GCGGGCGCGC TCGACGCGTT GGCCGCCGAC
GACGCCGGGC GACGTCTCGC GGACGCCGTC GAGAGTGGCT GGTGCCTCGA CCTGGGCGCG
TCGACCGGCG GGTTCACCGA CGTCCTGCTG CGGCGTGGGG CCGCGCACGT CGTCGCGCTC
GACGTCGGGC ACGACCAGCT CGTGGCGCGG CTGCGCGACG ACCCGCGCGT CACCGTGGTC
GAGGGATACA ACGTGCGCGA CCTCGACCGC GCGGACCTGG ACCGGTCGCC CGACCTGGTG
GTCGGCGACC TGTCGTTCAT CTCGCTCACG CTCGTGCTGC CGGCGCTCGC GGCCGTGCTC
GATCCCGGGG CGCCGGCGCT GCTCCTGGTC AAGCCGCAGT TCGAGGTCGG CAGGGAGCGG
CTCGGCACGG GAGGCGTCGT GCGCGACCCT GCGCTCCACG TCGACGCCGT GCTCGATGTG
ATCGCGACGG GCGCCCGGAC CGGGCTGCGT GCCCACGCCG TCGTGCCGAG CCCGCTGCCC
GGCCCCAGCG GCAACCGCGA GTACTTCGTC GCGTTCGAGC GTGGCGAGGC CACCGACGGC
GACGAAGTCC GTGCGGACGC CCTGGCGGCG GTGCGAGCCG CGGTGGCCTG GATCCCCGAG
GAGCTCGGCA CGAGCCGTCC GCCCGCGCTC GCGCTGGGCG TCGGCCGGCG CGACGTCGAT
CCGGTCGGGC GTGCAGCAGC CGTCAGGCCG GACTCGAACG ATCACGACCG CCGTCCGGGC
CCTTCGACAG TGCCTGAGCC GACCGTCGGC GAGGCGCCCG CCGCCACACC CGCGACCCCG
TCTTCCCGCA CCGGAGGTGC ATCGTGA
 
Protein sequence
MTPARVDAEL VRRGLARSRA HAAELVKAGR VSAEGRSVSK PSVVVPDDAA IDVVPDPADP 
GYASRAALKL AGALDALAAD DAGRRLADAV ESGWCLDLGA STGGFTDVLL RRGAAHVVAL
DVGHDQLVAR LRDDPRVTVV EGYNVRDLDR ADLDRSPDLV VGDLSFISLT LVLPALAAVL
DPGAPALLLV KPQFEVGRER LGTGGVVRDP ALHVDAVLDV IATGARTGLR AHAVVPSPLP
GPSGNREYFV AFERGEATDG DEVRADALAA VRAAVAWIPE ELGTSRPPAL ALGVGRRDVD
PVGRAAAVRP DSNDHDRRPG PSTVPEPTVG EAPAATPATP SSRTGGAS