Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1340 |
Symbol | |
ID | 8648861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 1460574 |
End bp | 1461620 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | hemolysin A |
Protein accession | YP_003325929 |
Protein GI | 269956140 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACGCCGG CGAGGGTCGA CGCCGAGCTC GTGCGCCGCG GTCTGGCGCG CTCGCGCGCG CACGCCGCCG AACTGGTGAA GGCGGGGCGG GTCTCGGCCG AGGGGCGGTC CGTCTCCAAG CCGTCGGTGG TCGTTCCCGA CGACGCCGCA ATCGACGTCG TCCCTGATCC CGCGGACCCG GGGTACGCGT CGCGGGCCGC GCTCAAGCTC GCGGGCGCGC TCGACGCGTT GGCCGCCGAC GACGCCGGGC GACGTCTCGC GGACGCCGTC GAGAGTGGCT GGTGCCTCGA CCTGGGCGCG TCGACCGGCG GGTTCACCGA CGTCCTGCTG CGGCGTGGGG CCGCGCACGT CGTCGCGCTC GACGTCGGGC ACGACCAGCT CGTGGCGCGG CTGCGCGACG ACCCGCGCGT CACCGTGGTC GAGGGATACA ACGTGCGCGA CCTCGACCGC GCGGACCTGG ACCGGTCGCC CGACCTGGTG GTCGGCGACC TGTCGTTCAT CTCGCTCACG CTCGTGCTGC CGGCGCTCGC GGCCGTGCTC GATCCCGGGG CGCCGGCGCT GCTCCTGGTC AAGCCGCAGT TCGAGGTCGG CAGGGAGCGG CTCGGCACGG GAGGCGTCGT GCGCGACCCT GCGCTCCACG TCGACGCCGT GCTCGATGTG ATCGCGACGG GCGCCCGGAC CGGGCTGCGT GCCCACGCCG TCGTGCCGAG CCCGCTGCCC GGCCCCAGCG GCAACCGCGA GTACTTCGTC GCGTTCGAGC GTGGCGAGGC CACCGACGGC GACGAAGTCC GTGCGGACGC CCTGGCGGCG GTGCGAGCCG CGGTGGCCTG GATCCCCGAG GAGCTCGGCA CGAGCCGTCC GCCCGCGCTC GCGCTGGGCG TCGGCCGGCG CGACGTCGAT CCGGTCGGGC GTGCAGCAGC CGTCAGGCCG GACTCGAACG ATCACGACCG CCGTCCGGGC CCTTCGACAG TGCCTGAGCC GACCGTCGGC GAGGCGCCCG CCGCCACACC CGCGACCCCG TCTTCCCGCA CCGGAGGTGC ATCGTGA
|
Protein sequence | MTPARVDAEL VRRGLARSRA HAAELVKAGR VSAEGRSVSK PSVVVPDDAA IDVVPDPADP GYASRAALKL AGALDALAAD DAGRRLADAV ESGWCLDLGA STGGFTDVLL RRGAAHVVAL DVGHDQLVAR LRDDPRVTVV EGYNVRDLDR ADLDRSPDLV VGDLSFISLT LVLPALAAVL DPGAPALLLV KPQFEVGRER LGTGGVVRDP ALHVDAVLDV IATGARTGLR AHAVVPSPLP GPSGNREYFV AFERGEATDG DEVRADALAA VRAAVAWIPE ELGTSRPPAL ALGVGRRDVD PVGRAAAVRP DSNDHDRRPG PSTVPEPTVG EAPAATPATP SSRTGGAS
|
| |