Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_1188 |
Symbol | |
ID | 8648706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 1282082 |
End bp | 1283845 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003325777 |
Protein GI | 269955988 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGATCGA AGAAGGCCAT CGCCCTGCTG ATGGCTCCGG TCCTCGGGGC GCTGACCCTG ACGGCCTGTT CCTCCGGCGC GAACGCCGAG GACGACACGT CGGCCGAGCC CGTCGCGCTC GACCAGGACT GGTCGACGTC CGACCCCATC ACCATCGACG TGTTCGACGG GCTGGCCAAC TACCAGGGCA TCCAGTCCGG GTGGTTCGGC AAGCTCGTCA AGGACAAGTT CAACATGGAG CTCAACATCA TCGCCCCGAA CGTCGCGGGC GGCGGTGACA CGCTCTACAA CACGCGCGTC GCGGGCGGCG ACCTCGGTGA CCTCATCATC ACCGACAAGG GCGAGAAGAT GGACGAGCTC ATCGCCGGCG GCCTGCTGCT CGACGTGTCC AAGTACTACG GCTCGATGGA GAGCGTCTCG CAGTACGACG CCGCAGTGCA GCGGCTCAAC GACGGCAAGG ACGGCATCTA CGGGCTCCCG ACGCAGGTGT CGACGCTCCC GCCGACCGCA CCCTCCGAGG GCATCGACCC CACGTTCGGC GCGTACCTGC GCTGGGACTA CTACGCCGAC GCCGGCTACC CGGAGATCGG CACGCTCGAA GACCTGCTGC CCATCCTCAA GGAGATGCAG GACGCCCACC CGACGGCCGA CAACGGCGGC CCGACGTACG GCCTGTCCCT CTTCAAGGAC TGGGACGGCA ACATGATGGT GATGGGCAAG CAGCCCGCGT GCCTCTACGG CTTCGACGAG ATGGGCTTCG TCCTGGCCAA GGCCGACGGC TCCGAGTACC AGAGCATCAT CGACTCCGAC TCGGCGTACG TGCGCTCGCT CCAGCTCTAC TTCGACGCCA ACCAGCTCGG CATCCTCGAC CCGGAGTCGA CGACGCAGAA CTACGACACG ATGTTCGCGA AGTACCAGAA CGGCCAGGTG CTCCTGTCGT GGTGGCCGTG GCTCGGCCAG TCGGCCTACA ACACCACCGC CAACCTCGAG GCCGGCAAGG GCTTCGAAAT GGTGCCGCTG GCCGACCAGG AGATCTTCTC CTACGGCGCC GAGGTCTACG GCGGCAAGCA GGTCCTCGCC ATCGGATCGC ACGCCGAGGA CCCGGACCGC ATCGCCGCGT TCGTCGACTG GCTGTACTCG CGCGAGGGCG TCCTCGCCTC CGGCAACCAG ACCATGGGTG CCGCCGGCCC CGAGGGCCTG ACGTGGGAGC TCGTGGGCGA CCAGCCTGAG CTCACCGACT TCGGCAAGGC CGCGATCCTC GGTGGCGACG GCGACGTCCC CGCCGAGTGG GGCGGCGGCA AGTACGCCGA CGGCGTCTCC GCGCTCAACG TCACCACGGT GCTGCCGATC GACACGGACC CGAAGACCGG CTACGAGTAC AACTACAAGT ACTGGCCCTC GGTGCAGGAG ATCACCGGCA CGGCGCTGAC CGACGACTGG TCGGCCCACA TGGACGACGC CACCTCGACC ATGGACTACC TCGTCAAGAA CGACCAGGTG CTCGTGGCCC CCGGCTCCGG CTTCACCACC CCGGCCGACT CCTCGGAGAT CGAGACGATC CGCAACCAGG TCAAGGCCAG CGTCGTGGAG TACTCCTGGA AGATGGTCTA CGCGAAGGAC CAGGCCGAGT TCGACTCGCT GCTCGCCCAG CTGCAGTCCA CGGCCGAGGG CCTGGGCTAC GCCAAGGTGC TCGAGGTCGA CATGGCCAAC GCGGAGGCGC AGAACGAGGC CCGCGAGGCC GTCGTGGACG CGTTCGCCCA GTGA
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Protein sequence | MRSKKAIALL MAPVLGALTL TACSSGANAE DDTSAEPVAL DQDWSTSDPI TIDVFDGLAN YQGIQSGWFG KLVKDKFNME LNIIAPNVAG GGDTLYNTRV AGGDLGDLII TDKGEKMDEL IAGGLLLDVS KYYGSMESVS QYDAAVQRLN DGKDGIYGLP TQVSTLPPTA PSEGIDPTFG AYLRWDYYAD AGYPEIGTLE DLLPILKEMQ DAHPTADNGG PTYGLSLFKD WDGNMMVMGK QPACLYGFDE MGFVLAKADG SEYQSIIDSD SAYVRSLQLY FDANQLGILD PESTTQNYDT MFAKYQNGQV LLSWWPWLGQ SAYNTTANLE AGKGFEMVPL ADQEIFSYGA EVYGGKQVLA IGSHAEDPDR IAAFVDWLYS REGVLASGNQ TMGAAGPEGL TWELVGDQPE LTDFGKAAIL GGDGDVPAEW GGGKYADGVS ALNVTTVLPI DTDPKTGYEY NYKYWPSVQE ITGTALTDDW SAHMDDATST MDYLVKNDQV LVAPGSGFTT PADSSEIETI RNQVKASVVE YSWKMVYAKD QAEFDSLLAQ LQSTAEGLGY AKVLEVDMAN AEAQNEAREA VVDAFAQ
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