Gene Xcel_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXcel_0961 
Symbol 
ID8648471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXylanimonas cellulosilytica DSM 15894 
KingdomBacteria 
Replicon accessionNC_013530 
Strand
Start bp1036370 
End bp1038061 
Gene Length1692 bp 
Protein Length563 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003325550 
Protein GI269955761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCACTG ACGCCAAGTC CCCGATCCTC GAGGTCCGCG ACCTCGGCGT CGAGTTCTTC 
GTCGACGGCG AGTGGTTGCC CGCCGCCGTG GACGTGTCCT ACGACGTCCG CCCCGGTGAG
GTCCTCGCCA TCGTCGGCGA GTCCGGCTCG GGCAAGACGC AGACCTCGAT GTCGCTCATC
GGCCTGCTGC CGCCCAACGG CCGCGCCACC GGCTCGGCCA AGCTCGCCGG GCGCGAGCTG
CTGGGCCTCG GCCACAAGCA GCTCTCGAAG GTGCGCGGCA AGGACGTCGC GGTGATCTTC
CAGGAGCCGA TGACGGCGCT GAACCCCGTC TACACGATCG GGTTCCAGAT CGTCGAGACC
CTGCGCGTGC ACTTCGACAT GAGCCCCAAG GCGGCCCGCG AGCGCGCCAT CGAGCTGCTG
CGCATGGTCG ACCTGCCCAA GCCGGAGCAG TCGGTCGACA AGTACCCGCA CCAGCTCTCG
GGCGGCCAGC GTCAGCGCGC CATGATCGCG CAGGCCCTGG CCTGCGAGCC CAAGCTGCTC
ATCGCGGACG AGCCGACGAC GGCGCTGGAC GTCACGGTGC AGGCCGAGAT CCTCAAGCTC
ATGCGCGACC TGCGCCACCG TGTCGACGCC GGCATCATCC TCATCACGCA CGACATGGGC
GTGGTCGCGG ACCTCTCGGA CCGCGTCATG GTGATGCGCC ACGGCAGCGT CGTCGAGTCG
GGCACCGCGG ACGAGCTCTT CAACCGCCCG CAGCACCCGT ACACCCAGCA GCTCCTGGAC
GCCGTGCCGC ACCTGGGCTC GATGTCGCAG GCGGCTCCCG CCTCCGCCGT CGAGCGGGTC
GAGGCCGTGC CCGCCTCCGA GGACCTCGCC CTCGAGGCGA AGGGCCTCGT CATCGAGTAC
CCCGCCCGTG GCCGCGTGCC CGCGTTCCGC GCCATCAACG GCATCGACCT GCACATCGGC
AAGGGCGAGG TCGTGGGCCT GGTCGGCGAG TCCGGCTCGG GCAAGACGAC CGTCGGCCGG
GCCGCCGTCG GCCTGCTGCC CGTGGCGGAG GGCTCGTTGA CGGTCAACGG CGTCGAGCTC
GCCGGCATCA AGCCCAAGGA CCTGCGCGCC GTGCGCCAGG ACGTGTCGAT CGTGTTCCAG
GACCCGGGCT CTTCGCTGAA CCCGCGCCTG CCCATCGGCG AGTCCATCGG CGAGCCGCTC
AAGCTGCACA AGATCGCCGA GGGCGCCGAG CTCGGCAAGC GCGTCGAGGC GCTGCTCGAC
CACGTGAACC TGCCGCGCTC CATGCGGAAC CGCTACCCGC ACGAGCTGTC CGGCGGTCAG
CGTCAGCGCG TCGGCATCGC CCGCGCCCTG GCCCTGTCGC CCAAGCTGCT CATCGCGGAC
GAGCCGACGT CGGCCCTCGA CGTGTCCGTG CAGGCGCGCG TGCTCGACCT GTTCCAGGAC
CTGCAGCGCG AGTACGGCTT CGCGTGCCTG TTCATCTCGC ACGACCTCGC CGTCGTCGAG
ATCCTGTCGT CGCGGATCGC CGTCATGAGC ATGGGCGACC TGGTCGAGGT CGGTCCGCGC
GAGCAGATCC TGCACCACCC GCGCGAGGAC TACACCCGCC GCCTGCTCTC GGCGGTCCCG
GTCCCGAACC CGGCGGAGCA GAAGCTGCGC CGCGAGGAGC GCGACCGCCT CCTGGCGGCC
TCCGGCCACT GA
 
Protein sequence
MSTDAKSPIL EVRDLGVEFF VDGEWLPAAV DVSYDVRPGE VLAIVGESGS GKTQTSMSLI 
GLLPPNGRAT GSAKLAGREL LGLGHKQLSK VRGKDVAVIF QEPMTALNPV YTIGFQIVET
LRVHFDMSPK AARERAIELL RMVDLPKPEQ SVDKYPHQLS GGQRQRAMIA QALACEPKLL
IADEPTTALD VTVQAEILKL MRDLRHRVDA GIILITHDMG VVADLSDRVM VMRHGSVVES
GTADELFNRP QHPYTQQLLD AVPHLGSMSQ AAPASAVERV EAVPASEDLA LEAKGLVIEY
PARGRVPAFR AINGIDLHIG KGEVVGLVGE SGSGKTTVGR AAVGLLPVAE GSLTVNGVEL
AGIKPKDLRA VRQDVSIVFQ DPGSSLNPRL PIGESIGEPL KLHKIAEGAE LGKRVEALLD
HVNLPRSMRN RYPHELSGGQ RQRVGIARAL ALSPKLLIAD EPTSALDVSV QARVLDLFQD
LQREYGFACL FISHDLAVVE ILSSRIAVMS MGDLVEVGPR EQILHHPRED YTRRLLSAVP
VPNPAEQKLR REERDRLLAA SGH