Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_0961 |
Symbol | |
ID | 8648471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 1036370 |
End bp | 1038061 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003325550 |
Protein GI | 269955761 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCACTG ACGCCAAGTC CCCGATCCTC GAGGTCCGCG ACCTCGGCGT CGAGTTCTTC GTCGACGGCG AGTGGTTGCC CGCCGCCGTG GACGTGTCCT ACGACGTCCG CCCCGGTGAG GTCCTCGCCA TCGTCGGCGA GTCCGGCTCG GGCAAGACGC AGACCTCGAT GTCGCTCATC GGCCTGCTGC CGCCCAACGG CCGCGCCACC GGCTCGGCCA AGCTCGCCGG GCGCGAGCTG CTGGGCCTCG GCCACAAGCA GCTCTCGAAG GTGCGCGGCA AGGACGTCGC GGTGATCTTC CAGGAGCCGA TGACGGCGCT GAACCCCGTC TACACGATCG GGTTCCAGAT CGTCGAGACC CTGCGCGTGC ACTTCGACAT GAGCCCCAAG GCGGCCCGCG AGCGCGCCAT CGAGCTGCTG CGCATGGTCG ACCTGCCCAA GCCGGAGCAG TCGGTCGACA AGTACCCGCA CCAGCTCTCG GGCGGCCAGC GTCAGCGCGC CATGATCGCG CAGGCCCTGG CCTGCGAGCC CAAGCTGCTC ATCGCGGACG AGCCGACGAC GGCGCTGGAC GTCACGGTGC AGGCCGAGAT CCTCAAGCTC ATGCGCGACC TGCGCCACCG TGTCGACGCC GGCATCATCC TCATCACGCA CGACATGGGC GTGGTCGCGG ACCTCTCGGA CCGCGTCATG GTGATGCGCC ACGGCAGCGT CGTCGAGTCG GGCACCGCGG ACGAGCTCTT CAACCGCCCG CAGCACCCGT ACACCCAGCA GCTCCTGGAC GCCGTGCCGC ACCTGGGCTC GATGTCGCAG GCGGCTCCCG CCTCCGCCGT CGAGCGGGTC GAGGCCGTGC CCGCCTCCGA GGACCTCGCC CTCGAGGCGA AGGGCCTCGT CATCGAGTAC CCCGCCCGTG GCCGCGTGCC CGCGTTCCGC GCCATCAACG GCATCGACCT GCACATCGGC AAGGGCGAGG TCGTGGGCCT GGTCGGCGAG TCCGGCTCGG GCAAGACGAC CGTCGGCCGG GCCGCCGTCG GCCTGCTGCC CGTGGCGGAG GGCTCGTTGA CGGTCAACGG CGTCGAGCTC GCCGGCATCA AGCCCAAGGA CCTGCGCGCC GTGCGCCAGG ACGTGTCGAT CGTGTTCCAG GACCCGGGCT CTTCGCTGAA CCCGCGCCTG CCCATCGGCG AGTCCATCGG CGAGCCGCTC AAGCTGCACA AGATCGCCGA GGGCGCCGAG CTCGGCAAGC GCGTCGAGGC GCTGCTCGAC CACGTGAACC TGCCGCGCTC CATGCGGAAC CGCTACCCGC ACGAGCTGTC CGGCGGTCAG CGTCAGCGCG TCGGCATCGC CCGCGCCCTG GCCCTGTCGC CCAAGCTGCT CATCGCGGAC GAGCCGACGT CGGCCCTCGA CGTGTCCGTG CAGGCGCGCG TGCTCGACCT GTTCCAGGAC CTGCAGCGCG AGTACGGCTT CGCGTGCCTG TTCATCTCGC ACGACCTCGC CGTCGTCGAG ATCCTGTCGT CGCGGATCGC CGTCATGAGC ATGGGCGACC TGGTCGAGGT CGGTCCGCGC GAGCAGATCC TGCACCACCC GCGCGAGGAC TACACCCGCC GCCTGCTCTC GGCGGTCCCG GTCCCGAACC CGGCGGAGCA GAAGCTGCGC CGCGAGGAGC GCGACCGCCT CCTGGCGGCC TCCGGCCACT GA
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Protein sequence | MSTDAKSPIL EVRDLGVEFF VDGEWLPAAV DVSYDVRPGE VLAIVGESGS GKTQTSMSLI GLLPPNGRAT GSAKLAGREL LGLGHKQLSK VRGKDVAVIF QEPMTALNPV YTIGFQIVET LRVHFDMSPK AARERAIELL RMVDLPKPEQ SVDKYPHQLS GGQRQRAMIA QALACEPKLL IADEPTTALD VTVQAEILKL MRDLRHRVDA GIILITHDMG VVADLSDRVM VMRHGSVVES GTADELFNRP QHPYTQQLLD AVPHLGSMSQ AAPASAVERV EAVPASEDLA LEAKGLVIEY PARGRVPAFR AINGIDLHIG KGEVVGLVGE SGSGKTTVGR AAVGLLPVAE GSLTVNGVEL AGIKPKDLRA VRQDVSIVFQ DPGSSLNPRL PIGESIGEPL KLHKIAEGAE LGKRVEALLD HVNLPRSMRN RYPHELSGGQ RQRVGIARAL ALSPKLLIAD EPTSALDVSV QARVLDLFQD LQREYGFACL FISHDLAVVE ILSSRIAVMS MGDLVEVGPR EQILHHPRED YTRRLLSAVP VPNPAEQKLR REERDRLLAA SGH
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