| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xcel_0916 |
|---|
| Symbol | |
|---|
| ID | 8648426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylanimonas cellulosilytica DSM 15894 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013530 |
|---|
| Strand | - |
|---|
| Start bp | 983074 |
|---|
| End bp | 984111 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003325505 |
|---|
| Protein GI | 269955716 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.684035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGTTGC CATCGCGGAG TAGCATCCCG GCCATGGCCA GCACTCGCCG CGGACCCTCC
ATCGAGGACG TCGCGCGCCT CGCCGGCGTC TCCGCCCAGA CGGTCTCGCG CGTGTCCACC
GGTGCCGAGA ACGTGCGCGC CGACACCCGC GCCAAGGTGC TCACCGCGAT GGACCAGCTC
GGCTACGCCC CCAACCACGC CGCCCGCGCG CTGCGCAACG GGGCGTTCGG CACCATCGGG
CTGCTCGCCC ACCGCTTCGA GCGCACCGGC GAGGCCCTGA CCACCGAGGG CGTCATCGAG
GCCGCCCGGG CGCAGGACTA CGCCGTCACC ATCGTCGACG TCGGCCGCAC CGACGACGAC
TGGCAGGGCG CGGCGCAGCG CCTCACGCAT CTGGCCGTCG ACGGGCTCGT GATCATCCGC
GCCGAGACCG CCACCCCCGA GTCGCTGGTG CTGCCGGCCG GCCTCGCCGT CGTCGTCTCC
GACTCCCGGC TGGTGGGCCG CCACCCCGCC GTCGTCGCCG ACCAGGTGGC CGGGACGCAG
GTCGCCGTGC AGCACCTGCT GAGCCTCGGC CACCGCACCG TGCACCACCT GGCCGGGCCC
ACTGACTCCG AGCCGGCGGC CGCACGCGCC GCGGCCTGGG CCCGCACCCT GGAGGAGGCG
GGCGTGCGCC CGCCCGCACC GTGGCGCGGC GACTGGACCG CGGCATCGGG CTATGCCCGC
GGCCGCGACC TGCCCGACGA CGTCACCGCC GTCTACGCCG CGAACGACGA GATGGCCGTC
GGGCTGATCC GCGCCCTGCA CGAGCGCGGC CTTCGGGTGC CCGACGACGT CAGCGTCGTC
GGCTTCGACG GCATCCGGAT CGGCGAGTAC ACCTGGCCGC CGCTGACCAC GGTGCGGCAG
GACTTCCACA CCATCGGCCG GGAGCTGGTG CGGCTCGTGC TCGAGCAGTT CCGCACGCGC
ACCCGGCTCG GCACCGAGCG GGTGGTGATC CCCACCGAGC TGGTGGTGCG GGGCACGACG
GCGCCGCCGC GGGCGTAG
|
|---|
| Protein sequence | MTLPSRSSIP AMASTRRGPS IEDVARLAGV SAQTVSRVST GAENVRADTR AKVLTAMDQL
GYAPNHAARA LRNGAFGTIG LLAHRFERTG EALTTEGVIE AARAQDYAVT IVDVGRTDDD
WQGAAQRLTH LAVDGLVIIR AETATPESLV LPAGLAVVVS DSRLVGRHPA VVADQVAGTQ
VAVQHLLSLG HRTVHHLAGP TDSEPAAARA AAWARTLEEA GVRPPAPWRG DWTAASGYAR
GRDLPDDVTA VYAANDEMAV GLIRALHERG LRVPDDVSVV GFDGIRIGEY TWPPLTTVRQ
DFHTIGRELV RLVLEQFRTR TRLGTERVVI PTELVVRGTT APPRA
|
|---|
| |