Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_0897 |
Symbol | |
ID | 8648407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | + |
Start bp | 965975 |
End bp | 967315 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003325487 |
Protein GI | 269955698 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0316444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGAT CTCTAGTCGG GACCGTCGGC ATGGTGGCCG CGGCGACGAT GGTTCTGGCC GCGTGCTCCA GCGGCGCCAC CGCCGACGAC GGCACCGGCG GCGACACCAC GAACGATCCC ACCAGCACCG CGGCCGACGA CCAGCAGCCC GTCACCCTCG TCCTGAACTG GTGGGGCAAC GACGACCGTG CCGACCGCTA CGAGCAGGCC GTCGACCTCT TCGAGGCCGA GTACCCCTGG ATCACCGTCC AGACCGGCTT CTCGGACTTC CCGTCCTACT GGGAGTCCAA GGCCACCGAG GCCGCGGGCA GGTCCCTGCC CGACGTCTTC CAGTTCGACT CCGCCTACCT GCGGGAGTAC GGCGAGTTCG GCCACATCCT CGACCTGCAG CCGCTCGTCG ACGACGGCAC CATCGACCTG TCGGGCTACG ACGAGTCCCT CGTGTCCGCC GGCAACCTCG ACGGCAAGCA GGTCGCCATC CCGACGTCGA CCAACACGCT CGCGATGTTC CTCAACCCCG ACGTCATCGA GGCCACGGGC GTCGAGTTCC CCGGCGAGGG CTACACCTGG GACGACCTCG ACGCCTTCAT CCAGGAGGTC GCGGACGCCG ACGTCAGCAC GGCCGACGGC TACAAGATCT ACGGCTCCGG CGACTACACG GGCACGTTCT GGTTCTTCCT GCAGCACCTC GTCCAGGAGG GCACCGACCC GTTCACCCAG GACGGCCAGC TCAACTTCGA CGCCGACGAC GTCATCGCCT GGCTCGACCT GACGGCCGAC CTGCGCGAGG CCGAGGCCCT CTACCCGACC GCGCGCGGCA CGGCGGTCAA GCCCAAGGGC GGTCTGACCA TGAACGAGGC CGGCTCGGAG ATGTCGTGGG ACAACTTCCT CGCCGGCTAC GTGGCCGACT CGGGCAAGGA CAACATCGCG ATCCTGCCGA TCCCGGCGGG CACGGACGGG ACGAGCAACT TCTTCCGCCC GTCCATGCAC CTCGCGGCGG GCGCCAACAC CGAGCACCCG CACGAGGCGG GCCTGCTGAT CAACTTCCTC CTCACCGACC CTGAGGTGGG CGCGATCTTC GGCACCTCCA AGGGCGTCCC GGGCGACAAG GCCCAGCGGG ACGCCATCGA GGCGGAGGAG GGCTCGGTCG ACGCGCTCGT CATCGCCTAC GAGGAGCAGG TCGGCGAGAC CGAGACGACG ACGGCACCGA TCCCCGTCAA GGGGTTCGGC ACCATCGAGG CCTCGTGGCT GACCCTGTCC GAGGAGCTCG GCAACGGCCT GATCACCCCG GCGGACTTCG CGGACCGCTG GTTCGCCGAG GTCGCGAACG CCGTCGGCTG A
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Protein sequence | MKRSLVGTVG MVAAATMVLA ACSSGATADD GTGGDTTNDP TSTAADDQQP VTLVLNWWGN DDRADRYEQA VDLFEAEYPW ITVQTGFSDF PSYWESKATE AAGRSLPDVF QFDSAYLREY GEFGHILDLQ PLVDDGTIDL SGYDESLVSA GNLDGKQVAI PTSTNTLAMF LNPDVIEATG VEFPGEGYTW DDLDAFIQEV ADADVSTADG YKIYGSGDYT GTFWFFLQHL VQEGTDPFTQ DGQLNFDADD VIAWLDLTAD LREAEALYPT ARGTAVKPKG GLTMNEAGSE MSWDNFLAGY VADSGKDNIA ILPIPAGTDG TSNFFRPSMH LAAGANTEHP HEAGLLINFL LTDPEVGAIF GTSKGVPGDK AQRDAIEAEE GSVDALVIAY EEQVGETETT TAPIPVKGFG TIEASWLTLS EELGNGLITP ADFADRWFAE VANAVG
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