Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_0466 |
Symbol | |
ID | 8647969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 544002 |
End bp | 545345 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | isochorismate synthase |
Protein accession | YP_003325063 |
Protein GI | 269955274 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGGAT CCGCCCTGCC CCAGCCTGCG TTCCCCGCGG GGTCCGCGCC CGACGGCGGC CGGGCGGTCG GCGCCCAGCC CCTCGTGGTC CGGACCGCCC CGATCTCCCT GCCCGACGGC GGCCTCACCA CCCTGGTCGA CCTGCTCCCC GATGCGAAGC CGCTCGCCTG GGTGCGCCGC GGCGACGGCA TCGTCGGCTG GGGCGAGGCG CTGCGGATCA CCACCACCGG CGAGGCGCGC TTCAGCGACG CCGACGCCGC GTGGCAGTCC CTGCTCGACC GCGCCGTCGT CCGCGACGAC GTCCGCCTGC CGGGCACCGG CCCGGTCGCG TTCGGCTCCT TCGCCTTCGA CGCCACGTCC GACGACGGCG GAGTCCTCGT CGTGCCGCGC GTCGTCGTCG GGCGGCGCGG GGACCGGGCG TGGATCACCA CCATCGCCGC CGGGCTGGAC GCCGCACCGA CCGCCGCCCT GCTGGACCCG GCGCGCCGCA CGCCGGTGAC CGGTCCCGGC GCGGTCACCG AGTCCGACGG CGCGGTCGCC GCGGCCGACT GGCCCGCGAT CGTGGCCGAC GCCGTCGAGC GCATCCAGGC CGGGCGTCTC GAGAAGGTGG TCCTCGCGCG CGACGTCGTG GCCACCACGG GCCGGGCCCT CGACCCGCGC TGGCTGCTGC GCCGCCTCGC CGCCGGGTAC GAGGCCACCT GGACGTTCTC GGTCGCCGGC ATGGTGGGCG CCACCCCGGA GCTGCTGGTC CGCTCGGAGA AGGGCCTGGT CGCCTCGCGC GTGCTGGCCG GGACCATCCG CCGCGCGCCC GGCATGACCG ACGACGACGC CCTGCTGCAC GCCGCCCAGC TCGCACGGTC TTCCAAGGAC CTCGAGGAGC ACGAGCACGC CGTCGTCTCC GTGGCGCGGG CACTCGAACC GTTCTGCACC TCGATGAACG TGCCCGAACA GCCGTTCGTG CTGCACCTGC CGAACGTCAT GCACCTGGCG TCGGACGTGA CCGGGGTCCT CGACCGGGAC GCCACGCCGT CGTCGCTCGC GCTCGCCGCG GCGCTCCACC CGTCGGCCGC GGTGTGCGGG ACGCCGACGG TGCCCGCGCG CGACCTCATC CGCGAGATCG AGGGCATGGA TCGCGGGCGG TACGCCGGCC CCGTCGGGTG GACGGGTGCC GACGGCGACG GTGAGTGGGG CATCGCGCTG CGCTCCGCCC GGCTCGACGA CGCCGACCCG CGACGGGTGC GACTCTTCGC GGGCTGCGGC GTCGTGGCGG CGTCGGACCC GGCCGCCGAG CTGGCCGAGT CGGAGGCCAA GCTGGTCCCG ATGCGCTGGG CCCTGCGCGG CTGA
|
Protein sequence | MSGSALPQPA FPAGSAPDGG RAVGAQPLVV RTAPISLPDG GLTTLVDLLP DAKPLAWVRR GDGIVGWGEA LRITTTGEAR FSDADAAWQS LLDRAVVRDD VRLPGTGPVA FGSFAFDATS DDGGVLVVPR VVVGRRGDRA WITTIAAGLD AAPTAALLDP ARRTPVTGPG AVTESDGAVA AADWPAIVAD AVERIQAGRL EKVVLARDVV ATTGRALDPR WLLRRLAAGY EATWTFSVAG MVGATPELLV RSEKGLVASR VLAGTIRRAP GMTDDDALLH AAQLARSSKD LEEHEHAVVS VARALEPFCT SMNVPEQPFV LHLPNVMHLA SDVTGVLDRD ATPSSLALAA ALHPSAAVCG TPTVPARDLI REIEGMDRGR YAGPVGWTGA DGDGEWGIAL RSARLDDADP RRVRLFAGCG VVAASDPAAE LAESEAKLVP MRWALRG
|
| |