Gene Xcel_0427 details

Gene Information

• Locus tag: Xcel_0427
• ID: 8647930
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: +
• Start bp: 501704
• End bp: 507823
• Gene Length: 6120 bp
• Protein Length: 2039 aa
• Translation table: 11
• GC content: 72%
• Product: Fibronectin type III domain protein
• Protein accession: YP_003325024
• Protein GI: 269955235

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGGGA GAACTGTGGG CCTCTTGTCA CGACTTCGCG CCAACCACCG CAAGGCCGTC 
TCGACCGGAA CCGTGTTCGC GCTGGCCGCC GGGCTGGTGA CCGCCGCGGT GCTGACCGAC 
GGCGAAGCCA GCGCTGACCT GCAGCTCAAC GACGCCGGGG TCTGGGTCAC GAACCAGTCC 
TCAGGGCTGG TCGGCCGGTT CAACACGAGC GCCGGAACCC TGGACGGCAC CCTCCTCGCG 
GGCTCCGCCG CGTTCGACGT CGACCAGCAG GCCCGCTACG TGCTGGTGGC CGACGACGGG 
TCGTCGACCG CCAGCGCCGT CGACGTCGCG CGGCTCGAGT TCTCCTCCAC CACCAAGGTT 
CCCGCGGGCG CACGGCTCGC GATGGGCGGC GGCGTCGTCG CCGTCGTCGA CGACGAGTCC 
GGCTCGCTGT GGGTCACGAC CCTCGACGGG CTGCCCGGGC TGGACCCCGC GAAGACCGAC 
CCGACCGCCG AGCTCGACGG CGCGGCCGAG GTGGTGGTCT CGGAGACCGG GGTGGTGCAC 
GCCGTGGTCC CCGACCGGGA CGTGCTGTGG ACGGTGAAGC CGGGTGCGGA CCCCGAGACG 
AAGACGCTCG ACCTCATGCA ACGGGGCGAC GACGTCGTGC TCACGACGGT GGGGGACGAC 
GCCGTGGTGC TCGACCGCAC CCGGGGCCGG CTGCGCCTGC CCGGCGGTGA CACGGTCGAG 
GTCGTGAACG CGCAGGGCGC GCAGCTCCAG CAGCCCGGGC CCGAGGCCGA CACGGTCGTC 
TACGCGACGT CGTCGGCACT CGTCGAACAG CCGCTGCGCG GCGGGGACGC GACCCTGCGG 
CAGGCCTCGG GCATGCCGGC GGCGCCCGTG CGGGTGGCGG GCTGCCTCTA CGGGGCGTGG 
TCCGGCACGG GCCAGATCCT GCGCGACTGC GAAGGCACGG ACCGGGACGT CGACGACGCG 
CTCGAGGACC TCGACCAGAC GGCCGTCCTG CGGTACCGCG TCAACCGCGA CGCCGTCGTG 
CTGAACGACC TCGCGGCCGG GACCGTGTGG ATCGCGATGG ACCAGTTCGA GCGGGTCGAC 
GACTGGGAGA CCACGCAGCC CGACGAGGGC GAGCAGGACG GCACGAGCCC CGACAAGACC 
ACCCCCGAGA TGGTCGACAG CACGGTGGTC GACCGGGAGA AGCAGACCCC GCCCACGGCG 
CAGGACGACG AGTTCGGCGT CCGCCCGGGC CGCGCCACCG TGCTCGACGT GCTGTCGAAC 
GACATGGACC GTGACGGCGA CGTCATCACC GCGACCCGCA CCGGCGACCA GCCCGCCCCG 
ATCACCATCG AGGAGGTGCT CGACGGCGCC GCCCTACAGG CCGTGGTGCC CGAGGACGCC 
ACCGGCACCG TCCAGTTCCC CTACACGGTG TCCGACGGGC GTGGCGGCAC CGACGACGCG 
CAGGTCTCGC TGCGCGTGGT GCCCTGGGGG GAGAACGCCG ACCCGTTCCA GCTCGGCGAG 
CCCGTGCTCC GCGTCCAGAA GGGCGGCCGG GGTGCGATCC GCGTGCTGCC CTACTTCCGC 
GACCCCGACG GCGACGACAT CTACCTGGCC ACGGCCTCGG TGTCGGTGGA CGGCGACGAG 
GCGCGCGCCT ACCCGGACGG CCTCGTCGAG TTCCGTGACG GCGGGTCTGC GACCGGCCGC 
AAGAACGTCA CCGTCACGGT GGGTGACGGC CACGGCGGTG TCGTCGAGGG CACGCTGTGG 
GTCGACGTCA TCAACTCCCA GGAACCGCCG GTCGCGGTCG GGGACCACGT CGCGGTGCTG 
GCCGGTCAGC CGGTCACGGT CGAGCCGCTG GCGAACGACT CGGACCCGAA CGGCGACTCC 
ATCCGCCTCG TGAGCGTGAG CGAGGCCGCG CCCGCGCAGA TCACGCCCAA CTACGACGCG 
GGCACGTTCT CGTTCCTGGC ACGGGACCCG GGCTCGTACG ACGTGCTCTA CCAGGTGTCG 
GACGGCCCGT CGACCACCAC GGGCGTGGTC CGCGTGGACG TCCGCGCCCC GGACGCCGCG 
AGCGGCGCCC CCGTCGTCGT CTCCGACACG GTGATGCTCT CGGCCGGTGG CACCGCCCTG 
GTCGACGTGC TCGCGAACGA CACCGACCCT GCGGGCGGGG TGCTCGTGGT GCAGTCCTTC 
GAGGTGCCCG ACGACGCGGG CCTCAGCGTC ACGGTGCTCG CCCACCAGGT GCTGCGCATC 
TCCGAGTCGC GGCGCCTGGC CGAGTCCGTG GTGATCCGGT ACACGGTGTC CAACGGCACC 
CAGGTCGCCA CCGGCGAGGT GCGCGTCCTG CCCGTGCCCG CCCCCGATCG GCTCCAGCCG 
CCGAACGCCG AGCCCGACGA GGTCACGGTG CGCGTCGGCG ACTACGTGAC CATCGACGCG 
CTGGCCAACG ACACCCACCC CGACGGGCTG GAGCTCACGA TCGCCGACGA CCTCGAGCAG 
GGCGTCGACC CGGAGCAGGG CGAGATCTTC GTCTCGGAGG GCATGCTCCG CTTCCGTGCC 
GAGGCGCAGG AGGGCACCGC GTACGCCATC TACAAGGTGC GCGACCCGAA CGGGCAGGAG 
GACTCCGCCC AGGTCACGAT CCACATCCGC GGCGGTGACG ACAACCAGGC GCCCACCCCG 
CCCGACGTCG CGGCGCGCGT CATCACCGGC GGCGTCGTGC GGGTGCGCAT CCCGCTGGAC 
GGCATCGACC CGGACGGCGA CTCCGTCCAG CTCGTCAACA TCGTCGCCCC GCCCGCGCTG 
GGCATCGCCG AGATCGTCGA CGGCCGGTTC ATCGACTTCC AGGCCACGCG CGGCGCGATC 
GGGCAGGACA CGCTCACGTA CTCGGTGGTC GACGCACGCG GCGCGAAGGC GCAGGGCGTC 
GTCCGGATCG GCATCGCCCC GCCCGCCACG ACGAACCACG CCCCGATCGC CGAGGACGAC 
GTGGTGTGGG CGCGGCCCGG ACGCACCGTC TCCGCGGCGC CGCTGGGCAA CGACTCCGAC 
CCCGACGGCG ACCAGTACGG CCTGGTGGGC GGCGGGATCG AGGCGGCAGA CCCGCTCGAC 
CCGAAGGTCG AGGGCGAGCG GATCGTGGTG CGCACCCCGG AGGAGGAGGG CGCCTACGGC 
TTCTACTACA CGATCGAGGA CACCTGGGGT GCCCGTGCCA TGGGCGCCGT GACCCTCGAG 
GTCTCGCTCG ACGCACCGCT GCAGGCCCCG ATCGCCCGTG ACGACATCGT GCTCGACAGC 
GCGATCACGT TCGACCAGAC CTCGGTGACG GTCCCTCTGC TGGACAACGA CGAGGACCCC 
GACGGCGCCG CCAGCGAGCT GGAGGTGGCC GTCGACGCCG ACACCGCCAC CGTCACGACC 
ACGTCCGACG ACGAGACCGT CGTCGAGGTG CGGCTGACCG CCCAGCGGCA GGTCATCACC 
TACACCGTGA CCGACCAGGA CGGCCTGCAG GGCAAGGCGT TCCTGCTGGT GCCCGCGGGC 
AAGACGCCCG AGCTCGCCGA CGAGCTCCGG GAGGAGGACG AGGAGCTCAC CGAGGACCAA 
GCGGAGCTGA CCGGGCCCGC CCCGATGCTC AAGGCGAACT TCTCGCCCCT CGAGGTCAAG 
TCCGGCGAGC CGCTCACCGT CGACGTCGCG GACGCCGTCG TCGTCGCCGA GGGTGGTGCG 
GCACGGATCG CCGACCCCGC CACCGCCAAG GCCGTCGCCG GCTCCGTGGT GGTCCAGGAC 
GAGCGGCGCC TCGTGTACAC CTCGGCCGAG GACTACGTCG GACCCGCCGC GGTGAGCGTG 
CTGGTCACGG ACGGGCTGGG GAGCAGCCCG CAGGACGCGG ACCACACCCT GGTGATCCAG 
GTGCCGATCA CCGTGCTGCC GCCCGACAAC CTGCCCCCCG AGCCGGGCCA GCCGTCGGGC 
CAGGTGGCGG CGGGCGAGGA GAGCACGGTC GACCTGGGCC GGTTCGCCAC CGACCCGAAC 
GATGACGCGC TCACGTTCGC GCTGGGCACG CTGCCCGACG GGCTGTCCGC GACCCTCACC 
GGCTCCGTCG TGACGCTCGA GGCCGCCCCG GACCTGGTCA AGGGCGTGGG CCTGACCGTC 
CCGTTCACGG TGTCCGACGG CGCGAACCCG TCCGTCGACG GTGAGCTCGC GGTGACGGTC 
GTCGCCTCGA TCCGCCCGCT CGCCAAGGCC AACCCCGACT CCGTCGAGGG CGCGCACCAG 
GGCGTGCCCG TCTCCGTTCC GGTGCTGGCC AACGACATGG ACCCGTTCGA CCCGAAGGGG 
CTCGAGCTGA TCTCGGCGGT GGTCCAGACG GGCCAGGGCA GCACCGAGCT GGACGGCGAC 
GAGGTGATCA TCACCCCGGC CCCGACCTTC GTCGGCACCC TCGTCGCGTC CTACCGCATC 
CAGGACGCCA CCAAGGATCC CGACCGCTTG GTCGAGGGGA CCGTCACGGT CACCGTGCTG 
GGCGTCCCGG AGGCGCCCGC GGCGGCGTCG ATCGAGGAGG TGCGTTCGAA GACCGTCGTG 
CTGTCCTGGA CGCCGCCGCA GAACAACGGT GCGCCGATCA CCGGGTACAC GGTGACCTCG 
AGCCAGGGCG ACGTGTTCGA CTGCGCGACG ACGACCTGCA CCCTCGACGG GCTGACGAAC 
AACGTCACCT ACACGTTCAC CGTGGTGGCG ACCAACGAGG TCGGCCCGTC CGACCCGTCG 
CCCGCCTCGG CACCCGCCCG GCCCGACGAG AAGCCCGACC CGCCGGCCGC CCCGAAGCTC 
GCCTTCGGCG ACGGCTCGCT CACCGTCACC TGGACCAACG CGACGTACAC CGACCGCTCC 
CCGATCAGCG AGGTCAACCT GCAGATCTCG CCGGCCCCGC CGTCGGGCGC GCTCCAGAAG 
AAGGGACTCA CCGGCGAGAC GACCGTGTGG GAGGGCCTGG AGAACGGTGT CGCCTACAAG 
GTGCAGGTGC AGGCCGTGAA CGCCGCCCCC GACCCCTCGG AGTGGGGTGA GTGGTCGACG 
GAGATGGTGC CTGCCGGCAA GCCCGACGCG CCGGGCGCGC CGACCGCGAG CCGGACGGCC 
AGCGGTGCCG TGAACGTGAA GTGGAACGCG CCGGCGAGCA ACGGCGACGC GATCAGCAAC 
TACTACGTGG ACGTCTACCG GGACGGCTCC CTGGTGCAAG AGAACGTCGA CCTCAAGACG 
GCGACGTCGC ACGACTTCAC CGGCCTGACC ACCACCGCGT CGTACACGTT CGCGGTGTCG 
GCGAAGAACA AGGCCGGGGA GGGCGCGACC AGCTCGCGGT CCAACGCCGC GATCCCGTAC 
GGCGCCCCCA AGGCGCCCAC CAACGTCAAG GCCACCGACA ACAAGGGCGT GCCTACCGTC 
ACCTGGAGCG CCGCGGACGG CAACGGCTCA CCGGTCATCG ACTACACGGT CACGGCGTCG 
GGTGGCAAGA CCATGACGAC GACGGGCACC AGCGTGAACT TCACCGGCCT GACGGCAGGG 
ACGACGTACA CGTTCACCGT GACCGCCAGG AACCTGGGCG GTACCTCCAG CGCGAGCGCC 
GCGTCGGGCG GGGTCAAGGC ATACGGCCTC CCGTCGGCAC CCAGCGTCAC CTGGACCAAG 
ACCACGGCGA CCGACGGGTA CTTCACCGTC AACGCCCCGA GCAGCTGGAA CGGTGACACG 
GGCACGGTGA GCTGGAGCCT CAGCGGCAGC GAGACGAAGT CGGGTACGGG AACCGGCCGC 
ATCGACATCA CCGGCGGCCA CAGCAAGTCG TACAAGGTGA CGACGTCGGC CACCAACGGC 
GCCGGCACCA CCACGGGCGG CACCGCCACC GGGACGACGG ACGCCCCGCC GCCCCCGCCG 
AACCCGCAGG TGCGGGTCAC CAACTCCGGT CGGCCGGGGA CGTACAACAA CGACTGCGTG 
AGCGCCTGCC AGACGTTCCT GTTGCAGGCC AACGCGGACT TCCCGTCCGG GAAGCACACG 
TTCGTCTGCT ACAACTCCTC CGGTGGGGAC CACGCCTTCG GTACCGCGAT GGAGACGACG 
CTCAACGCGA ACGGAACCGT GGAGCTGAAC TGCTACCTCG GCTACACGGG CGGCGCTGAC 
GTCTGGGTCA GCGTGGACGG GCACCTGAAC TACTCGGTCC GCACGACCTG GTTCAGGTGA 

 

Protein sequence

MSGRTVGLLS RLRANHRKAV STGTVFALAA GLVTAAVLTD GEASADLQLN DAGVWVTNQS 
SGLVGRFNTS AGTLDGTLLA GSAAFDVDQQ ARYVLVADDG SSTASAVDVA RLEFSSTTKV 
PAGARLAMGG GVVAVVDDES GSLWVTTLDG LPGLDPAKTD PTAELDGAAE VVVSETGVVH 
AVVPDRDVLW TVKPGADPET KTLDLMQRGD DVVLTTVGDD AVVLDRTRGR LRLPGGDTVE 
VVNAQGAQLQ QPGPEADTVV YATSSALVEQ PLRGGDATLR QASGMPAAPV RVAGCLYGAW 
SGTGQILRDC EGTDRDVDDA LEDLDQTAVL RYRVNRDAVV LNDLAAGTVW IAMDQFERVD 
DWETTQPDEG EQDGTSPDKT TPEMVDSTVV DREKQTPPTA QDDEFGVRPG RATVLDVLSN 
DMDRDGDVIT ATRTGDQPAP ITIEEVLDGA ALQAVVPEDA TGTVQFPYTV SDGRGGTDDA 
QVSLRVVPWG ENADPFQLGE PVLRVQKGGR GAIRVLPYFR DPDGDDIYLA TASVSVDGDE 
ARAYPDGLVE FRDGGSATGR KNVTVTVGDG HGGVVEGTLW VDVINSQEPP VAVGDHVAVL 
AGQPVTVEPL ANDSDPNGDS IRLVSVSEAA PAQITPNYDA GTFSFLARDP GSYDVLYQVS 
DGPSTTTGVV RVDVRAPDAA SGAPVVVSDT VMLSAGGTAL VDVLANDTDP AGGVLVVQSF 
EVPDDAGLSV TVLAHQVLRI SESRRLAESV VIRYTVSNGT QVATGEVRVL PVPAPDRLQP 
PNAEPDEVTV RVGDYVTIDA LANDTHPDGL ELTIADDLEQ GVDPEQGEIF VSEGMLRFRA 
EAQEGTAYAI YKVRDPNGQE DSAQVTIHIR GGDDNQAPTP PDVAARVITG GVVRVRIPLD 
GIDPDGDSVQ LVNIVAPPAL GIAEIVDGRF IDFQATRGAI GQDTLTYSVV DARGAKAQGV 
VRIGIAPPAT TNHAPIAEDD VVWARPGRTV SAAPLGNDSD PDGDQYGLVG GGIEAADPLD 
PKVEGERIVV RTPEEEGAYG FYYTIEDTWG ARAMGAVTLE VSLDAPLQAP IARDDIVLDS 
AITFDQTSVT VPLLDNDEDP DGAASELEVA VDADTATVTT TSDDETVVEV RLTAQRQVIT 
YTVTDQDGLQ GKAFLLVPAG KTPELADELR EEDEELTEDQ AELTGPAPML KANFSPLEVK 
SGEPLTVDVA DAVVVAEGGA ARIADPATAK AVAGSVVVQD ERRLVYTSAE DYVGPAAVSV 
LVTDGLGSSP QDADHTLVIQ VPITVLPPDN LPPEPGQPSG QVAAGEESTV DLGRFATDPN 
DDALTFALGT LPDGLSATLT GSVVTLEAAP DLVKGVGLTV PFTVSDGANP SVDGELAVTV 
VASIRPLAKA NPDSVEGAHQ GVPVSVPVLA NDMDPFDPKG LELISAVVQT GQGSTELDGD 
EVIITPAPTF VGTLVASYRI QDATKDPDRL VEGTVTVTVL GVPEAPAAAS IEEVRSKTVV 
LSWTPPQNNG APITGYTVTS SQGDVFDCAT TTCTLDGLTN NVTYTFTVVA TNEVGPSDPS 
PASAPARPDE KPDPPAAPKL AFGDGSLTVT WTNATYTDRS PISEVNLQIS PAPPSGALQK 
KGLTGETTVW EGLENGVAYK VQVQAVNAAP DPSEWGEWST EMVPAGKPDA PGAPTASRTA 
SGAVNVKWNA PASNGDAISN YYVDVYRDGS LVQENVDLKT ATSHDFTGLT TTASYTFAVS 
AKNKAGEGAT SSRSNAAIPY GAPKAPTNVK ATDNKGVPTV TWSAADGNGS PVIDYTVTAS 
GGKTMTTTGT SVNFTGLTAG TTYTFTVTAR NLGGTSSASA ASGGVKAYGL PSAPSVTWTK 
TTATDGYFTV NAPSSWNGDT GTVSWSLSGS ETKSGTGTGR IDITGGHSKS YKVTTSATNG 
AGTTTGGTAT GTTDAPPPPP NPQVRVTNSG RPGTYNNDCV SACQTFLLQA NADFPSGKHT 
FVCYNSSGGD HAFGTAMETT LNANGTVELN CYLGYTGGAD VWVSVDGHLN YSVRTTWFR