Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xcel_0074 |
Symbol | |
ID | 8647569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylanimonas cellulosilytica DSM 15894 |
Kingdom | Bacteria |
Replicon accession | NC_013530 |
Strand | - |
Start bp | 78585 |
End bp | 83459 |
Gene Length | 4875 bp |
Protein Length | 1624 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | ATP-dependent helicase HrpA |
Protein accession | YP_003324673 |
Protein GI | 269954884 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.292944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACCG CACCAGCCGC ACCACAGCCG CCGTCGCCCG ACGACGACGG CCGGCGTCGT GACGGCGGAC GCCGTCGGCG AGGTCGACGC GAGGGTCAGC GCGACCCACG GCGCGGCCCT GAGGGCGCCG GCCAGCGCGG CCCTCAGCGC ACCGGCCAGC GCGGCCCACG CCGCGTCTCG CGGGCGCACC TGGACAAGCT GGCCGCCACC CGCACCGCCG TCGTCGTGCC CCCCATCACC TATCCGGAGC AGCTGCCCGT CAGCGCACGC CGGGAGGACA TCGCGACGGC GATCCGCGAG AACCAGGTCG TCGTCGTCGC GGGCGAGACG GGATCCGGCA AGACGACGCA GCTGCCGAAG ATCCTGCTGG ACCTCGGCCG CGGGCGGGCC GGGCAGATCG GCCACACGCA GCCGCGGCGC ATCGCGGCAC GCAGCGTCGC CGAGCGCATC GCCGAAGAGC TGAGGACCAC ACTCGGGGAG ATCGTCGGCT ACCAGGTGCG GTTCACGGAC CAGTCGAGCG AGCAGACCCT CGTCAAGGTG ATGACGGACG GCATCCTGCT CGCGCAGATC CAGCGGGACC CGGAGCTGCT CGCCTACGAC ACGATCGTGA TCGACGAGGC GCACGAGCGG TCGCTCAACA TCGACTTCCT GCTCGGGTAC CTCTCGCGGC TGCTGCCGCG CCGGCCCGAC CTCAAGGTGA TCATCACCTC CGCGACCATC GACTCGCAGC GGTTCGCGGA GCACTTCTCG CCATCGCACC TGGCGGCGCT GGGCGGGGCT CCCGAGGCCG TCGTCGACGT GCTGCCGAAG GCGGCGCCCG TGGTCGAGGT GTCGGGGCGC ACCTACCCGG TCGAGATCCG GTACCGGCCG CTCGTCCCCG AGGTCAGCGA GAACGGGCTG CAGAAGAAGG GCGAGGAGAG AGACCTCGTC ACCGGCATCA TCGAGGCCTG CGACGAGCTC ATGCGCTGCG GACCGGGGGA CATCCTCGTG TTCCTCTCGG GCGAGCGGGA GATCCGCGAC GCGCTCGACG GGCTCGAAGG GCATCTCGGT GCGCGCGCTC GCGACCCGCG GCACCCGCAG CACGTCGAGA TCCTGCCGCT GTACTCGCGG CTCTCGGCCG CCGAGCAGCA CCGCGTCTTC GCCGCACACC CCGGCCGGCG CATCGTGCTG TCGACCAACG TCGCCGAGAC CTCGTTGACC GTCCCCGGCA TCCACTACGT CGTCGACACC GGCCTGGCGC GCATCTCGCG CTACTCCAAG GCCACCAAGG TGCAGCGCCT GCCGATCGAG GCGATCTCGC AGGCGTCCGC GAACCAGCGG TCCGGGCGGT CCGGGCGCGT GGCCGACGGC GTCGCCGTCC GCCTGTACTC CCAGGCCGAC TTCGAGGCCC GCCCCGAGTA CACCGAGCCC GAGATCCTGC GGACCTCGCT CGCGTCGGTG CTGCTGCAGA TGATCGCCGT CGGCGTCGTC GAGAGCCCTG ACGAGATGGC CCGGTTCCCG TTCGTCGAGA AGCCGGACAC GCGCGCGGTC CGCGACGGCG TGATGCTGCT GCGCGAGCTC GGCGCCCTGG AGACAGTGGT AGAGCCGACC CCCGCGGTGG TAGAGCCTGT CGAAACCACC CCCAGCCCGG TGGTTGAACC CCCCAGCCCG GTGGTTGAGC CTGTCGAAAC CACCCCACCG CCGTCGGACG TGGTTTCGAC AGGCTCAACC ACCGGGGGTC GGACCTCGAC CACCGGTGCG GGCCGCACGA CGACGCGGCT GACCACCGTC GGACGGCAGC TCGCCCAGCT GCCGATGGAT CCACGGCTGG CACGCATGAT CATCGAGGGC GCCCGGCGGG GTGCGGCCCG CGAGGTCGCC GTGATCGCGG CGGCGCTGTC GGTGCAAGAC CCCCGCGAGC GCCCCGCCGA GGTCCGCGAG CGTGCCGACC AGCTCCATGC CCGGTTCGCG GACCCGACGT CGGACTTCCT GAGCTACCTC AACCTGTGGG AGTACCTGCG CGACCAGCAG CGCGACCTGT CCGGGTCGGC GTTCCGGCGC CTGTGCAAGG CGGAGCACCT CAACTACCTG CGCGTGCGCG AGTGGCAGGA CGTCGTCGCG CAGCTCCGGC AGATGGCGAA CGAGCTGGGC ATCAACCTGT CCTCGCGCGC TTCGGTGGTT GAGCCTGTCG AAACCACCCC GCGGGTCGAC GGCGGGGTGG TTTCGACAGG ATCGACCACC GCGGAAGGCG CCGACGACGG TCAGCCCCGC AGCGGTGAGT GGCGGCGCGT GTGGGACGGC GACACCATCC ACCGCGCGCT CCTGGCCGGT CTGCTGTCCC AGGTGGGCAT GCAGGACACC GGCGAGATCA AGGCCTCCTC GGTCGCCCAC CTCAAGGGCG AGGCGCGGGC TCGTGCGCTG CGGCAGCAGG CCAAGCGGGT GCGCAACGAG TACCTGGGCG CGCGCGGGGC GAGGTTCGCG ATCTTCCCCG GCTCGCCGCT GTCGAAGAAG CCGCCGGCGT GGGTCATGGC GGGCGAGCTG GTGGAGACCT CGCGCCTGTG GGCGCGGGAC GTGGCGCGCA TCCAGCCCGA GTGGGCCGAG GAGCTCGCGG GCGATCTCGC GCGCCGCACC TACTCCGACC CGCACTGGTC CACCAAGCAG GGCGCCGCGA TGGCCACCGA GAAGGTGCTG CTGTACGGCG TCCCCATCGT CAGCGACCGG CCGGTGCTGT TCGCCCGCGT GGACCCGGAA GCGGCCCGGG AGATGTTCAT CCGGCATGCG CTGGTGCAGG GCGAGTGGAC CACGCACCAC ACGTTCTTCG CCGAGAACCG CCGTCTGCTG GAGGAGGCCG AGCAGGTCGA GGCCCGTTCC CGGCAGCGCG GCCTGGTCGC CTCCGAGGAC GACCTGTTCG CCTTCTACGA CGAGCGTGTC CCCGCGTCCG TCGTGAGCGC GCGGCACTTC GACCAGTGGT GGTCGCGCGC CCGGCGCGAG ACCCCGGACC TCCTGACGTT CCGCCTCGAG GACCTCGTCG ACGTCGACGC CGTGGACCCG TCGCAGTTCC CGTCGTCGTG GACGCAGGGC GAGCTCACCC TGCCGCTGAC CTACCAGTTC CGCCCCGGGT CCGACGCCGA CGGCGTCACC GTGCACGTGC CGCTCTCGGT GCTGCCGCGG CTCTCGCCGT CGGGCTTCGA CTGGATGGTG CCCGGACTGC TCGAAGAGCT GTGCGTCGCC ACGATTCGCT CCCTTCCCAA GGCCGTACGC GTGCAGCTCG TGCCCGCGCC CGACGTCGGG AACGCCGTCG CGGGCTGGCT GCGGCAGAAC ACGCCGACGT GGGAGGACAT GGCCCGGGCG GGTGACATGG CCGAGCCCTT CCACGTGGCG TTCACGCGCG CGGTGCGTGC GCTGCGCGAC GTCGTCGTGC CCGGCGACGC CTGGGACACC GAACGGGTCG AGCGCCTGCC CGCACACCTG CGCATGACCT TCCGCGTCGT GGAGTCCGGT GTGAAGTCCG GCGGGCCGAC GACGGCGGCG GGCTCCCGCG GAAGCGGTCG TGGTGGGCGA GGGCGCGGCC GGGACGGCCG GGGTTCCCCG AGCGCCGCGG CTGCCGTCTC GCCGTCGGGC ACGGGCGCGG CGGGTGCTGC CATCGACGAG TCGAAGGATC TCCTCGCGCT GCAGCGACGC CTTGCCCCGA AGGCGGAGGC GGCGGTACGC GCCGCGGTCA AGGGCGCGGT CGCGGTCGCC CTGGAGGAGG CCCGCTCGCG CACGGCGGCC CTCTCGGCGG GTGGCTCTGC TGAAGCCAAC CCCTCGGTGG TTGAGCCTGT CGAAACCACG GGTCGGCGCG TGGTTTCGAC AGGCTCAACC ACCGGAGGAG GCGGCTCAAC CACCGGAGGA GGCGGCTCAA CCACCGGAAG GCCGGGAGGC TCGACCACCG GAGGCGGCCG CGGGGTGGTC GCCGAGCGGC TCGGGCTGGC CACGTGGCCG GACGGGCTCC CCGACGGGCG GCTGCCCGAC GTCGTCTCGA CGGATCTGGG CGGAGGAGTC GTCGTGCGCG GCTATCCGGC GCTCGTCGAG GAGCCGGGAC CGAAGCAGGA ACCCACGGTC GCGCTGCGCA TCCTGGCCGA TGCGCTGGAG CAGCCGGCGA CGCACGCGCG CGGGGTGCGG CGGCTGTTGC TCGCCGAGAA CCGGCTCACC GCGGGGCGGG TCACGTCCCG GTGGAGCGGC ACGCAGGCGC TCACCCTCGC TGCGAGCCCG TACCGGAACA CGAACCTGCT CGCCGAGGAT CTGCAGCTGG CCACTGTCAT GGCGCTGACC AGCCCTGCCG CGGACCTCGC CCCCGGAACT CCGGCAGGGC CGCACGCCGT ACAGATCCGC GATGCCGAGT CGTACAACGC CGCGAAGGCG CACGTCCGCA CGCACCTCGA GGACGAGACC TACCGGGTCG CGGGTCATGT GGTCGCGGCG CTGACCGCCT GGCGGACCCT GGAGTCCGAG GTCCGCAAGA CGTCCTCGCT CGCCCTGCTC AACACGCTGC AGGACATCCG CGAGCACGCG GCCACGCTCA TCCACGACGG TTTCGTCAGC GCTACCCCGC CCCGTCGGCT GCCGCACCTG GTCCGCTACC TGCGGGCCGC GTCGTACCGG CTGGAGAAGG CGCAGGCCTC CCCGCACCGC GACGCCGAGC TGGCCTGGCG GATCCACGAC GTCGAGGAGG CGTACGCGAA GGCGCGCGCC GCCTACGCCG CCGGCCCGGC GGACGCCGCC CGGGCCGCCG AGCTCGCCGA GGTCCGCTGG CTGATCGAGG AGCTGCGTGT GTCCCTGTTC GCCCAGCAGC TCGGCACCGA CGGCACCGTC TCGGAGAAGC GCATCCGCAA GACTTTGGCC CCCAATGGCT GGTGA
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Protein sequence | MSTAPAAPQP PSPDDDGRRR DGGRRRRGRR EGQRDPRRGP EGAGQRGPQR TGQRGPRRVS RAHLDKLAAT RTAVVVPPIT YPEQLPVSAR REDIATAIRE NQVVVVAGET GSGKTTQLPK ILLDLGRGRA GQIGHTQPRR IAARSVAERI AEELRTTLGE IVGYQVRFTD QSSEQTLVKV MTDGILLAQI QRDPELLAYD TIVIDEAHER SLNIDFLLGY LSRLLPRRPD LKVIITSATI DSQRFAEHFS PSHLAALGGA PEAVVDVLPK AAPVVEVSGR TYPVEIRYRP LVPEVSENGL QKKGEERDLV TGIIEACDEL MRCGPGDILV FLSGEREIRD ALDGLEGHLG ARARDPRHPQ HVEILPLYSR LSAAEQHRVF AAHPGRRIVL STNVAETSLT VPGIHYVVDT GLARISRYSK ATKVQRLPIE AISQASANQR SGRSGRVADG VAVRLYSQAD FEARPEYTEP EILRTSLASV LLQMIAVGVV ESPDEMARFP FVEKPDTRAV RDGVMLLREL GALETVVEPT PAVVEPVETT PSPVVEPPSP VVEPVETTPP PSDVVSTGST TGGRTSTTGA GRTTTRLTTV GRQLAQLPMD PRLARMIIEG ARRGAAREVA VIAAALSVQD PRERPAEVRE RADQLHARFA DPTSDFLSYL NLWEYLRDQQ RDLSGSAFRR LCKAEHLNYL RVREWQDVVA QLRQMANELG INLSSRASVV EPVETTPRVD GGVVSTGSTT AEGADDGQPR SGEWRRVWDG DTIHRALLAG LLSQVGMQDT GEIKASSVAH LKGEARARAL RQQAKRVRNE YLGARGARFA IFPGSPLSKK PPAWVMAGEL VETSRLWARD VARIQPEWAE ELAGDLARRT YSDPHWSTKQ GAAMATEKVL LYGVPIVSDR PVLFARVDPE AAREMFIRHA LVQGEWTTHH TFFAENRRLL EEAEQVEARS RQRGLVASED DLFAFYDERV PASVVSARHF DQWWSRARRE TPDLLTFRLE DLVDVDAVDP SQFPSSWTQG ELTLPLTYQF RPGSDADGVT VHVPLSVLPR LSPSGFDWMV PGLLEELCVA TIRSLPKAVR VQLVPAPDVG NAVAGWLRQN TPTWEDMARA GDMAEPFHVA FTRAVRALRD VVVPGDAWDT ERVERLPAHL RMTFRVVESG VKSGGPTTAA GSRGSGRGGR GRGRDGRGSP SAAAAVSPSG TGAAGAAIDE SKDLLALQRR LAPKAEAAVR AAVKGAVAVA LEEARSRTAA LSAGGSAEAN PSVVEPVETT GRRVVSTGST TGGGGSTTGG GGSTTGRPGG STTGGGRGVV AERLGLATWP DGLPDGRLPD VVSTDLGGGV VVRGYPALVE EPGPKQEPTV ALRILADALE QPATHARGVR RLLLAENRLT AGRVTSRWSG TQALTLAASP YRNTNLLAED LQLATVMALT SPAADLAPGT PAGPHAVQIR DAESYNAAKA HVRTHLEDET YRVAGHVVAA LTAWRTLESE VRKTSSLALL NTLQDIREHA ATLIHDGFVS ATPPRRLPHL VRYLRAASYR LEKAQASPHR DAELAWRIHD VEEAYAKARA AYAAGPADAA RAAELAEVRW LIEELRVSLF AQQLGTDGTV SEKRIRKTLA PNGW
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