Gene Xcel_0029 details

Gene Information

• Locus tag: Xcel_0029
• ID: 8647524
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Xylanimonas cellulosilytica DSM 15894
• Kingdom: Bacteria
• Replicon accession: NC_013530
• Strand: +
• Start bp: 33805
• End bp: 34350
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 70%
• Product: RNA polymerase, sigma-24 subunit, ECF subfamily
• Protein accession: YP_003324628
• Protein GI: 269954839

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGACG AGACGCGCGA CGAGGCGTCG TTCACCACCG CGTTCCGCGC CTCCTACGAC 
GACGTGCGCG CCTTCCTCGC CCGACGCGTC GACCCCCAGG CCGCTGAGGA CCTCACCGCC 
GAGGTCTTCA CCCGCGCCTG GAACACCTGG CACCGCTCAC CCATCCCGCC CCAGCCCTGG 
CTCTTCGGCA TCGCCCGCCA CCTCGTCGTC GACCGTTACC GCGACACGGA GCGACGCCAA 
CGACTCCAGT CCCGCATGGA GAACGATCGC CCACTCGACC TCGACGAAGC GCGAGCCATC 
GACACGAGCC TCGACTTCCG CCACGCGTGG GCCCAGCTCT CCGACCGAGA CCGCGAAGTC 
CTCGCCCTCA TCGCCTGGGA CGGACTGTCC GTGACCGACG CTGCCACCGT CATCGGCACG 
ACCCGCGCCG CCTACTCCGT CCGCCTCACA CGGGCACGAC GCCGACTCGC ACACCTGCTC 
GACCAGGCGG GCCCCACCAC CGCGTCCGCC ACCAGATGCA CGACCGTCGA AAGGAGCCGG 
GTATGA 

 

Protein sequence

MQDETRDEAS FTTAFRASYD DVRAFLARRV DPQAAEDLTA EVFTRAWNTW HRSPIPPQPW 
LFGIARHLVV DRYRDTERRQ RLQSRMENDR PLDLDEARAI DTSLDFRHAW AQLSDRDREV 
LALIAWDGLS VTDAATVIGT TRAAYSVRLT RARRRLAHLL DQAGPTTASA TRCTTVERSR 
V