Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_5073 |
Symbol | |
ID | 5420366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009717 |
Strand | - |
Start bp | 296635 |
End bp | 297402 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640873727 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001409507 |
Protein GI | 154243934 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00771979 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.364643 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAATC GCTTGAAGAA TGAAGTCATC GCGATCACTG GCGGCGGCGC CGGTATCGGG CTCGCTATAG CAAGCGCGGC GCTGCGCGAG GGGGCGAAGG TTGCGCTGAT CGACCTCGAC CAAGGTCTGG CGGAGCGATC CGCGGCGATG CTCAGCACCG GTGGCGCAGT GGCGAAGGGT TTTGGTGCTG ACGTCACCAA GGCGGCAGAC ATCACCGCGG CCATCACCTC CGCCGAACAG ACCATTGGCT CGCTGACGGG GCTCGTCAAC AACGCCGGTA TCGCCGGCTT CGGCTCAGTT CATGACGCCG ACGCGGCAGC CTGGGACCGG ATCATGGCAG TCAACGTGAC GGGGACCTTT CTGGCCTCCA AGGCCGCGCT CGCCGGCATG CTGGAACGAC ACAAGGGCAC GATCGTCAAT TTTGGCTCCG TCGCTGGCCT CGTCGGCATC CCGACCATGG CGGCCTACTG CGCAGCCAAG GGCGCAATCG TCAATCTGAC GCGTCAGATG GCGGCGGACT ACTCGGGCAG GGGCGTTCGG GTCAACGCCG TCTGTCCCGG CACCGTCACC TCGACCGGCA TGGGGCAGCA GCTGCTTGGC AGCGATACCA GCCCGGAAGT TCAGGCTCGC CGGCTGGCGA AATATCCGAT CGGGCGGTTC GGCACCCCCG AGGATATCGC CGAGGCGGTG ATCTTTCTCC TGAGCGATCA GGCGGCCTTT GTGACCGGCG CGGCGTTTGC CGTGGACGGC GGGATGACGG CGATATGA
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Protein sequence | MSNRLKNEVI AITGGGAGIG LAIASAALRE GAKVALIDLD QGLAERSAAM LSTGGAVAKG FGADVTKAAD ITAAITSAEQ TIGSLTGLVN NAGIAGFGSV HDADAAAWDR IMAVNVTGTF LASKAALAGM LERHKGTIVN FGSVAGLVGI PTMAAYCAAK GAIVNLTRQM AADYSGRGVR VNAVCPGTVT STGMGQQLLG SDTSPEVQAR RLAKYPIGRF GTPEDIAEAV IFLLSDQAAF VTGAAFAVDG GMTAI
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