Gene Xaut_5073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_5073 
Symbol 
ID5420366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009717 
Strand
Start bp296635 
End bp297402 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content66% 
IMG OID640873727 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001409507 
Protein GI154243934 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00771979 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.364643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATC GCTTGAAGAA TGAAGTCATC GCGATCACTG GCGGCGGCGC CGGTATCGGG 
CTCGCTATAG CAAGCGCGGC GCTGCGCGAG GGGGCGAAGG TTGCGCTGAT CGACCTCGAC
CAAGGTCTGG CGGAGCGATC CGCGGCGATG CTCAGCACCG GTGGCGCAGT GGCGAAGGGT
TTTGGTGCTG ACGTCACCAA GGCGGCAGAC ATCACCGCGG CCATCACCTC CGCCGAACAG
ACCATTGGCT CGCTGACGGG GCTCGTCAAC AACGCCGGTA TCGCCGGCTT CGGCTCAGTT
CATGACGCCG ACGCGGCAGC CTGGGACCGG ATCATGGCAG TCAACGTGAC GGGGACCTTT
CTGGCCTCCA AGGCCGCGCT CGCCGGCATG CTGGAACGAC ACAAGGGCAC GATCGTCAAT
TTTGGCTCCG TCGCTGGCCT CGTCGGCATC CCGACCATGG CGGCCTACTG CGCAGCCAAG
GGCGCAATCG TCAATCTGAC GCGTCAGATG GCGGCGGACT ACTCGGGCAG GGGCGTTCGG
GTCAACGCCG TCTGTCCCGG CACCGTCACC TCGACCGGCA TGGGGCAGCA GCTGCTTGGC
AGCGATACCA GCCCGGAAGT TCAGGCTCGC CGGCTGGCGA AATATCCGAT CGGGCGGTTC
GGCACCCCCG AGGATATCGC CGAGGCGGTG ATCTTTCTCC TGAGCGATCA GGCGGCCTTT
GTGACCGGCG CGGCGTTTGC CGTGGACGGC GGGATGACGG CGATATGA
 
Protein sequence
MSNRLKNEVI AITGGGAGIG LAIASAALRE GAKVALIDLD QGLAERSAAM LSTGGAVAKG 
FGADVTKAAD ITAAITSAEQ TIGSLTGLVN NAGIAGFGSV HDADAAAWDR IMAVNVTGTF
LASKAALAGM LERHKGTIVN FGSVAGLVGI PTMAAYCAAK GAIVNLTRQM AADYSGRGVR
VNAVCPGTVT STGMGQQLLG SDTSPEVQAR RLAKYPIGRF GTPEDIAEAV IFLLSDQAAF
VTGAAFAVDG GMTAI