Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_5054 |
Symbol | |
ID | 5420500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009717 |
Strand | + |
Start bp | 274728 |
End bp | 276098 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640873708 |
Product | fumarate lyase |
Protein accession | YP_001409488 |
Protein GI | 154243915 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0605282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.269052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCT GGTCCTTCGG CTCGCGCGTC TATGGCAGCG CCTGGTCGAC GCCCGAGCTT CAGGCCCTGT TCGACGATGC CCCGCGCACG CGGCGGTGGC TCGACCTCCT CGGCACGTTG GCTGAGGTCG AGGGCGAGTT CGGTCTGATC CCCGAGACGA GCGCGGCCGC CATCGTCGCG GCTTGCCGCG ACGTGGTGCT CGACGACGAC TTCTTCGCCC GGTTCGCGGC CGGCTACCGG GCCACGGGCC ATTCCACCGC CGGGCTCATC GACGTCATCC GCCAGCGCTA CCCGGAGAGC GTGAGCGAGT GGTTCTATTT CGGCGCCACG GTGCAGGACA TCACCGACAG CTGGCTGATG CTGGTGCTCG GCGAGGCGCG CGCGCTGATC CTCGCCGATC TCGACCGTTC GATCGCCGCC GCCACCGCTC TGTGCCGCGC CCACCGCGAC ACAGTGATGG TGGGCCGCAC CCACGGCCAG CAGGGCCTTC CCATCACCTT CGGCTTCAAG GTGGCCGGCT GGCTCGCCGA ATTGCGCCGC CATCGCCAGC GCTTCGAGGA GATCGCGGGG CGCATGGGGA TCGGCCAGCT GTGCGGCGGC GTCGGCAGCC TTTCGGCGCT CGGCCGCCAT GGTCTCGAAG TCCAGCGCGC CTTCTGCGAG CGCATCGGGC TGCGCCCGCC CCTGACTTCA TGGACCGCCA GCCGCGACGT GCTCGTGGAA TGGGCCCAGC TCCTCACCCT CGTCGCCGGC ACCGCCGATC GGATCGGTCA TGAGGTCTAT TCGCTCCAGC GCGACGAGGT CGGCGAGGTG CGCGAGGGGG CGGCGGGCGA GCAGATCGGC TCCATTACCA TGCCGCACAA GCGCAATCCG GAGATCGCCG AGCATCTCGG CACGCTCTCG CGGGTGGTGC GCGCCAACAC CTCCGTGCTC GCCGAAAGCT TGCCCCATGA CCATGAGCGC GACGGCCGCT CCTGGAAGCT CGAATGGCAC GCCGTGCCCG AGCTCACCAT GGCAGCCGGC AAGGCGGTGC GATTGCTGGG GCAGATGCTG AGCAACCTCG AGGTTCGCGC CGATCGCATG CACGCCAATC TCGAGGCCTG CGACGGGCGC ATCTATTCGG AAGGGCTCAT GCTGGCGCTG GCGTGCAAGC TGGGCAAGCA GACCGCCCAT CGCTTGGTGC ACCAGGCCGC CGGCCGGGCG GGACAGGAGG GGCAGGCGTT CCGCGAGGTG GTGGGGCACG ATCCGGTCAT CGCCAGCACG CTCACCGGCG CGGACATCGA GCGTATCTTC AATGCGGGCC TTCAGACCGC GCAGTGCCAG GCGCTGGTCG ACCGGGTGCT CGCGGGGAGC GAGCGGGATG GAACAGCCTG A
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Protein sequence | MTGWSFGSRV YGSAWSTPEL QALFDDAPRT RRWLDLLGTL AEVEGEFGLI PETSAAAIVA ACRDVVLDDD FFARFAAGYR ATGHSTAGLI DVIRQRYPES VSEWFYFGAT VQDITDSWLM LVLGEARALI LADLDRSIAA ATALCRAHRD TVMVGRTHGQ QGLPITFGFK VAGWLAELRR HRQRFEEIAG RMGIGQLCGG VGSLSALGRH GLEVQRAFCE RIGLRPPLTS WTASRDVLVE WAQLLTLVAG TADRIGHEVY SLQRDEVGEV REGAAGEQIG SITMPHKRNP EIAEHLGTLS RVVRANTSVL AESLPHDHER DGRSWKLEWH AVPELTMAAG KAVRLLGQML SNLEVRADRM HANLEACDGR IYSEGLMLAL ACKLGKQTAH RLVHQAAGRA GQEGQAFREV VGHDPVIAST LTGADIERIF NAGLQTAQCQ ALVDRVLAGS ERDGTA
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