| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_5039 |
|---|
| Symbol | |
|---|
| ID | 5420555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009717 |
|---|
| Strand | - |
|---|
| Start bp | 257056 |
|---|
| End bp | 259035 |
|---|
| Gene Length | 1980 bp |
|---|
| Protein Length | 659 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640873693 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001409473 |
|---|
| Protein GI | 154243900 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.578261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGACA CCTACGCCGC AGACACCTTT CCCAAGCTGC TGCTCGACAA TGCCGCCCGC
CGCCCGGCCC GCCCCGCCAT GCGGGAGAAG CGATACGGAA TCTGGAAGAC CTGGACCTGG
GCCGACCTCA CCCGTGAGAT CGAGGCGCTG TCCCTCGGCC TGAAGGTAGC GGGCATCGCG
CCCGGCCAGC GCGTGGCGGT CATCGGCGTC AATCGCTCGC GCCTTTACTG GAGCATCCTC
GCCGCTCAGT GCGTGGGCGC CGTGCCGGTT CCGCTCTATC CGGACGCGGT AGCCCAGGAG
ATGGCTTACC TGCTCGCCCA TGCGGAAGTC ACCGCCGCCA TCGTCGAGGA CCAGGAGCAG
GTGGACAAGC TCCTGTCCGT GCTCCCCGAG CTGCCGGCGC TCCGGCTCAT CGCCTATGAC
GAACCCCGCG GCATGCGCGA TTATGTCTGC GAGGCCTGCG CGCTCACCAG CCTCGACGCG
ATCATGGCCT CCGGCCGGCA GGAGACGGCC GGCGCAGGCC TCAGCCGCGC CTTCACCGAC
TTAGTCGCCC GCACCGGGGG CGGCGACACC TCGATCATCC TCTATACGTC CGGCACCACC
GGTCGGCCGA AGGGGACTGT CATCTCCTCC GAGCGGGCCA TCAGCGCCGC CCGTCAGACG
GTGGCGGCGG ACCGCCTCGA CGAGACCGAC GAGGTGCTCG CCTATCTGCC CATCGCCTGG
GCCGGCGACC ACTATCTCAA CTATGCCCAG GCCTTCGTTG CCGGCTTCTG CATGTCCTGC
CCGGAAGAGC CGGAAACGGT GGCTATCGAC ATCTTCGAGA TCGGCCCCAC CTTCTATTTC
GCGCCGCCGC GGGTGCTGGA GGACCTGCTC ACCCGCATCA TGATCTCCAT GGAGGATGCG
GGCCGTGCCA AGCGCTGGCT GTTCGACCGC TTCATGGGCG TGGCGCGGTG CTGGGGCGAG
CCGATCCTCA ACGGAAGGGC CGACGTGCCG CTCCACGGCC GCCTGCTCTA CGCCCTCGGC
GAGGCCCTGA TCTACGGGCC GGTCAAGAAC GTGCTCGGCT TCTCGCGCAT CAAGGTCGCC
TATACGGCGG GCGAGGCCAT CGGGCCGGAC CTGTTCGCCT TCTACCGCTC CATCGGCGTG
AACCTGAAGC AGTTCTACGG CCAGACGGAA GCCTTCCTCT ACATCTCGAC CCAGCCCGAC
GGGCAGATCC GCTCCGATAC GGTGGGGCCG GCGGCGCCGG GGGTGGAGAT CCGCATCGTC
GAGAGCGGCG AGGTGCAGTT CCGCTCGCCG GGCCAGTTCG TGGAATATCT CGGCGATCCC
GTCCGCACCG CGGAGACCCT GACCCCGGAC GGATTCGTGC GCACGGGCGA CGCCGGCTTC
ATCGGCCAGG ACGGGCACCT GCGCATCATC GACCGCGCCA AAGACGTGGG CCGGCTCACC
GACGGAACCC TGTTCGCGCC CAAATATATC GAGAACAAGC TGAAGTTCTT TCCCAATATC
AAGGAGGCCG TGGCCTTCGG CGACGGGCGC GACTTCGTTG CCGCCTTCAT CAACATCGAC
CTCACCGCGC TCGGCAACTG GGCGGAGCGC AACGGCGTGA GCTACGGCTC CTACCAGGAG
CTGGCAGCGC TGCCGCAGGT CTACGACATC ATCCGAGGCC ACATCCGCCA GGTGAACCGT
GATCTCGCGG CGGAGCCCGC CATGGCGGGC GCGGCCATTA CCCGCTTCGT CATCCTGCAC
AAGGAGCTCG ATGCCGATGA CGGCGAGCTG ACGCGCACAC GCAAGGTGCG CCGCGCCTTC
GTGCAGGAGA AGTATGCCGG CCTTGTCGCC ACCCTCTACG ACAATGCCAG CGAATGCTTC
GTGAGCACCG AAGTCACGTT CGAGGATGGC CGCAAGGGAC GCATCGAGGC CACGCTCACC
CTCGCCGAGG TCGACGATCG GGGCCCGCAC CCTCACCAGC GCGAGACATT GGCAGCATGA
|
|---|
| Protein sequence | MADTYAADTF PKLLLDNAAR RPARPAMREK RYGIWKTWTW ADLTREIEAL SLGLKVAGIA
PGQRVAVIGV NRSRLYWSIL AAQCVGAVPV PLYPDAVAQE MAYLLAHAEV TAAIVEDQEQ
VDKLLSVLPE LPALRLIAYD EPRGMRDYVC EACALTSLDA IMASGRQETA GAGLSRAFTD
LVARTGGGDT SIILYTSGTT GRPKGTVISS ERAISAARQT VAADRLDETD EVLAYLPIAW
AGDHYLNYAQ AFVAGFCMSC PEEPETVAID IFEIGPTFYF APPRVLEDLL TRIMISMEDA
GRAKRWLFDR FMGVARCWGE PILNGRADVP LHGRLLYALG EALIYGPVKN VLGFSRIKVA
YTAGEAIGPD LFAFYRSIGV NLKQFYGQTE AFLYISTQPD GQIRSDTVGP AAPGVEIRIV
ESGEVQFRSP GQFVEYLGDP VRTAETLTPD GFVRTGDAGF IGQDGHLRII DRAKDVGRLT
DGTLFAPKYI ENKLKFFPNI KEAVAFGDGR DFVAAFINID LTALGNWAER NGVSYGSYQE
LAALPQVYDI IRGHIRQVNR DLAAEPAMAG AAITRFVILH KELDADDGEL TRTRKVRRAF
VQEKYAGLVA TLYDNASECF VSTEVTFEDG RKGRIEATLT LAEVDDRGPH PHQRETLAA
|
|---|
| |