Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_4936 |
Symbol | |
ID | 5420619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009717 |
Strand | + |
Start bp | 160036 |
End bp | 161265 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640873595 |
Product | Bcr/CflA subfamily drug resistance transporter |
Protein accession | YP_001409375 |
Protein GI | 154243802 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.380942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCTC CGCTGAGTGC TCCGCCGGCA TCAGAACAGC TGAAAGGGGG TGAGCCGCCC CACCGGAGGG CGCCGCTCTG GCTGCTGGCG CTCCTGGCCT TCTCCGGCAC CCTCGCCATG CACGTCTTCG TGCCGGCGCT GCCCGTCGCC CAGCAGGATC TCGGCGGCGG GATGGCGGCC ATGCAGCTCA CCATCAGCCT CTACATCCTC GGCCTCGCCG GCGGGCAGCT CGTCTACGGG CCTCTCGCCG ACCGGTTCGG GCGCCGGCCC GTCCTGCTGG CGGGGCTCTC GCTCTACACC GTCGCCGGCC TCGCGGCGAT GCTGGCGCCG AGCGTCAACG CCCTCATCGC CGCCCGGCTG TTCCAGGCGC TGGGCGGCTG CGCCGGCCTC GTGCTCGCGC GCGCCATCGT GCGCGACACC TCGGCGCCGG CGGACACCAC CCGGCGCCTC GCCTTGATGA ATCTCATGAT CACCGTCGGT CCGGGCGCGG CGCCGCTGGT GGGCGGCTTT CTCGCCGATG CGGCGGGATG GCGCTCCATC TTTATCGCCC TGACCCTGCT CGGCGTGGTC AACCTCCTGC TCACCTGGCG TCTCCTGCCG GAGACCGGAC GGGCAGCCGA AGGCGACGCC ATCGGTCTGA TGGAGGGCTA TGGCCAGTTG CTGCGGGCGC CCGCCTTCTG GGCCTATGCG GTGGGCGGCG GCTGCGCCAC CACCTCCCTC TATGGCTTCG TCGCGGCGGC CCCCTTCATC TTCACCGGCG AACTGCACCA GCCCACGGCC AGCGTCGGGG GCTATATCGC CCTCCTGGTC CTGGGGGTGT GGGTGGGCAG CATGCTGGCG AGCCGGCTCA TCGCCCGTGT TTCCGTCGGC CGCCTGCTGG TGGGCGCCAA TGGGGTCAGC GTGGCAGCCG CTTTCATCCT GCTCGCCGTC GTGCTGTCGG ATCAGCTCAC CGTGCCGCTC GCCATCGCCG CCGTGTTCAT ATTCTCCGTG GGCGTGGGCA CCGCGGCGCC CGCCGCGCTG GCTGAGGCCC TCAGCGTCAA TCCCCGTGTC GCCGGCTCCG CCTCGGGCCT CTACGGCGCC ATGCAGATGG CGGTCGGCGC CTTATGCACG GCCTTGGCCG GTGTCGGATC CGACCCCGCG CTCGCCGCCG CTCTCGTGCT TGCCGGCTCC GGCATCATCG CCCAAGCGGC CTTCTGGATA GCCGGGCGAC CAAGGCGCGC GGCTTCGTAG
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Protein sequence | MNAPLSAPPA SEQLKGGEPP HRRAPLWLLA LLAFSGTLAM HVFVPALPVA QQDLGGGMAA MQLTISLYIL GLAGGQLVYG PLADRFGRRP VLLAGLSLYT VAGLAAMLAP SVNALIAARL FQALGGCAGL VLARAIVRDT SAPADTTRRL ALMNLMITVG PGAAPLVGGF LADAAGWRSI FIALTLLGVV NLLLTWRLLP ETGRAAEGDA IGLMEGYGQL LRAPAFWAYA VGGGCATTSL YGFVAAAPFI FTGELHQPTA SVGGYIALLV LGVWVGSMLA SRLIARVSVG RLLVGANGVS VAAAFILLAV VLSDQLTVPL AIAAVFIFSV GVGTAAPAAL AEALSVNPRV AGSASGLYGA MQMAVGALCT ALAGVGSDPA LAAALVLAGS GIIAQAAFWI AGRPRRAAS
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