Gene Xaut_4792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4792 
Symbol 
ID5420588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009717 
Strand
Start bp4222 
End bp5313 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content71% 
IMG OID640873465 
Productintegrase family protein 
Protein accessionYP_001409245 
Protein GI154243672 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00356022 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCGA GCAGCGACCC CGCTCCTGAC CAGCTCGGCG ATGAGGACGG CCCTCCGGAT 
CCGGCTACGG CATTGGTAGC ATCGCAGGCC CCCTCCCCTG CCCTTCCGGC GCATCTCGAA
CGCCTCGCAG ACCGCGCACG GGACTACGTC GAGGCCGCAA GCTCGGCCAA CACGCGTCGC
GCCTATGCTT CCGACTGGAA GCACTTTTCC GCCTGGTGCC GGCGGCAGGG CCTTGAGCCC
CTCCCCCCTG CCCCGGAGGT GGTCGGGCTC TACATCACGG CCTGCGCGTC GGGCGCCGCC
ATTCCGGGTG GCGAGCCAAA TGCGGTCACG ACCATCGAGC GCCGGCTGTC CGCCATCTCC
TGGAACTACA CCCAGCGCGG CGCGGTGCTG GATCGGAGCG ATCGGCATAT CGCCACCGTG
CTGACGGGCA TCCGCAACAC CCACGCCGCC CCGCCCCGGC AGAAGGAAGC GGTCCTGCCC
GAGGATGTCA TCGCCATGCT GGAGACGCTC GACCGCGGCG CGCTGCGCGG CCTGCGGGAT
CGCGCCATGC TGCTCCTTGG CTTCGCCGGC GGCTTGCGCC GCTCCGAGAT CGTCGGCCTC
GACGTCGCCC GGGACCAGAC CGAGGACGGC CGCGGTTGGG TGGAGATCCT CGACAAGGGG
ATGATCGTGA CGCTCCGCGG CAAGACCGGC TGGCGGGAGG TCGAGGTCGG GCGTGGATCG
TCCGATGCCA CCTGCCCCGT GGTGGCGCTG GAAACCTGGC TCAAGCTGGC GAAGATCGGC
CACGGACCCC TGTTCCGGCG CGTGACGCGG CAAGGCAAGG ACGTTGGCCC CGACCGCCTG
ACCGACCGCG AGGTAGCACG CCTCGTCAAG CGCACGGCGC TCGCCGCCGG TGTCCGCGGC
GATCTCACCG AGGGCGAACG GGAGAAAAAA TTCGCCGGCC ATTCGCTGCG CGCCGGGCTC
GCCTCTTCCG CCGAGGTCGA CGAGCGGCAC GTCCAGAGGC AGCTCGGCCA TGCCAGCGCG
GAAATGACCC GCCGCTATCA GCGCCGACGG GATCGGTTCA GGGTCAACCT GACCAAGGCG
GCCGGTCTCT AG
 
Protein sequence
MVASSDPAPD QLGDEDGPPD PATALVASQA PSPALPAHLE RLADRARDYV EAASSANTRR 
AYASDWKHFS AWCRRQGLEP LPPAPEVVGL YITACASGAA IPGGEPNAVT TIERRLSAIS
WNYTQRGAVL DRSDRHIATV LTGIRNTHAA PPRQKEAVLP EDVIAMLETL DRGALRGLRD
RAMLLLGFAG GLRRSEIVGL DVARDQTEDG RGWVEILDKG MIVTLRGKTG WREVEVGRGS
SDATCPVVAL ETWLKLAKIG HGPLFRRVTR QGKDVGPDRL TDREVARLVK RTALAAGVRG
DLTEGEREKK FAGHSLRAGL ASSAEVDERH VQRQLGHASA EMTRRYQRRR DRFRVNLTKA
AGL