Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_4792 |
Symbol | |
ID | 5420588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009717 |
Strand | - |
Start bp | 4222 |
End bp | 5313 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640873465 |
Product | integrase family protein |
Protein accession | YP_001409245 |
Protein GI | 154243672 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00356022 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGCGA GCAGCGACCC CGCTCCTGAC CAGCTCGGCG ATGAGGACGG CCCTCCGGAT CCGGCTACGG CATTGGTAGC ATCGCAGGCC CCCTCCCCTG CCCTTCCGGC GCATCTCGAA CGCCTCGCAG ACCGCGCACG GGACTACGTC GAGGCCGCAA GCTCGGCCAA CACGCGTCGC GCCTATGCTT CCGACTGGAA GCACTTTTCC GCCTGGTGCC GGCGGCAGGG CCTTGAGCCC CTCCCCCCTG CCCCGGAGGT GGTCGGGCTC TACATCACGG CCTGCGCGTC GGGCGCCGCC ATTCCGGGTG GCGAGCCAAA TGCGGTCACG ACCATCGAGC GCCGGCTGTC CGCCATCTCC TGGAACTACA CCCAGCGCGG CGCGGTGCTG GATCGGAGCG ATCGGCATAT CGCCACCGTG CTGACGGGCA TCCGCAACAC CCACGCCGCC CCGCCCCGGC AGAAGGAAGC GGTCCTGCCC GAGGATGTCA TCGCCATGCT GGAGACGCTC GACCGCGGCG CGCTGCGCGG CCTGCGGGAT CGCGCCATGC TGCTCCTTGG CTTCGCCGGC GGCTTGCGCC GCTCCGAGAT CGTCGGCCTC GACGTCGCCC GGGACCAGAC CGAGGACGGC CGCGGTTGGG TGGAGATCCT CGACAAGGGG ATGATCGTGA CGCTCCGCGG CAAGACCGGC TGGCGGGAGG TCGAGGTCGG GCGTGGATCG TCCGATGCCA CCTGCCCCGT GGTGGCGCTG GAAACCTGGC TCAAGCTGGC GAAGATCGGC CACGGACCCC TGTTCCGGCG CGTGACGCGG CAAGGCAAGG ACGTTGGCCC CGACCGCCTG ACCGACCGCG AGGTAGCACG CCTCGTCAAG CGCACGGCGC TCGCCGCCGG TGTCCGCGGC GATCTCACCG AGGGCGAACG GGAGAAAAAA TTCGCCGGCC ATTCGCTGCG CGCCGGGCTC GCCTCTTCCG CCGAGGTCGA CGAGCGGCAC GTCCAGAGGC AGCTCGGCCA TGCCAGCGCG GAAATGACCC GCCGCTATCA GCGCCGACGG GATCGGTTCA GGGTCAACCT GACCAAGGCG GCCGGTCTCT AG
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Protein sequence | MVASSDPAPD QLGDEDGPPD PATALVASQA PSPALPAHLE RLADRARDYV EAASSANTRR AYASDWKHFS AWCRRQGLEP LPPAPEVVGL YITACASGAA IPGGEPNAVT TIERRLSAIS WNYTQRGAVL DRSDRHIATV LTGIRNTHAA PPRQKEAVLP EDVIAMLETL DRGALRGLRD RAMLLLGFAG GLRRSEIVGL DVARDQTEDG RGWVEILDKG MIVTLRGKTG WREVEVGRGS SDATCPVVAL ETWLKLAKIG HGPLFRRVTR QGKDVGPDRL TDREVARLVK RTALAAGVRG DLTEGEREKK FAGHSLRAGL ASSAEVDERH VQRQLGHASA EMTRRYQRRR DRFRVNLTKA AGL
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