Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_4757 |
Symbol | |
ID | 5421040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 5281385 |
End bp | 5283421 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640884021 |
Product | DNA topoisomerase IV subunit B |
Protein accession | YP_001419633 |
Protein GI | 154248675 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.125119 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCAAT CCGACGATCT TTTCGGCTCC ACCCCGCGTC CGAAGCCCGC CGGCAAGCCG GCCAAGGCGG CAGCTGCCGC CGTGCCGGCC ATGGATGCCG ACTACACCGC CGCGCACATT GAGGTGCTCG AAGGACTGGA ACCGGTACGT CGCCGGCCCG GCATGTATAT CGGCGGCACC GATTCGAAGG CGCTGCACCA CCTCTTCGCC GAGGTGATCG ACAATTGCAT GGACGAGGCG GTGGCCGGGC ACGCCACCTT CATCGAAGTG CAGATGGCGG CGGACGGCTA TCTCACCGTC TCCGACAACG GGCGCGGCAT TCCGGTGGAG GAACACCCCA AGTTCCCCGG CAAGTCGGCC CTCGAAGTGA TCATGACCAC CCTGCACGCC GGCGGAAAGT TCGACAGCAA GGTCTACGAG ACGTCCGGCG GCCTCCACGG CGTCGGCATC TCGGTGGTGA ACGCGCTGTC CGACGACCTC GAGGTGGAGG TGACGCGCAA CCAGACCCTC TACCGCCAGA GCTTCTCCAA GGGCGTGCCC CAGGGCAAGC TGAAGGAAGT CGGCCGCATC ACCAACCGGC GCGGCACCCG TGTGCGCTTC CATCCGGACC CCGAGATCTT CGGCCCCTCC GCCCGCTTCG AGCCGGCCCG GGTGTTCCGC ATGGCCCGCT CCAAGGCCTA TCTGTTCGGC GGCGTGGAAA TCCGCTGGTC CTGCGACCCC GAGCTGCTGA AGGGCATCGA GGGGGTTCCG GAGAAGACCA GCTTCCGCTT CCCCGGCGGC CTGCGCGACT ATCTCGCCGC CGACCTCGAA GGCCAGACCC TGGTGCATTC GGACATCTTC TCCGGCCGTA TCCAGAAGCC GGGCGGCCAT GGCTCGGTGG AATGGGCGGT GGCATGGGTG GCGGACGCGG ACGGCTCCAT CTCCTCCTAC TGCAACACCA TCCCCACCCC CGACGGCGGC ACCCATGAGA ACGGCCTGCG GGCCGTGCTG CTGAAGGGGC TGAAGGATCA TGCCGAGCGC TCCGGCCAGG GCAAGCGCGG CTCGGTCATC ACCGGCGACG ATGTCACCAC CGGCTGCGCC GCCATGCTCT CCGTGTTCGT GCGCGAGCCG GAATTCCAGG GCCAGACCAA GGACCGCCTC GCCACTGCCG AGGCCGCCCG CATCGTGGAA CAGGGCCTGC GCGACCCGTT CGACCACTGG CTCGCTGCCA ATCCGGTGCA GGCCAGCCGG CTGCTCGAGC ACGTCATCGA CCGCGCCGAG GAGCGCCTGC GCCGCAAGCA GGAAAAGGAA GTCTCTCGCA AGACCGCCGT GCGCAAGCTG CGCCTGCCCG GCAAGCTGGC CGACTGCTCC AACACCGAGG CGGCCGGCTC CGAGATCTTC ATCGTGGAGG GCGACTCGGC CGGCGGCTCG GCCAAGCAGG CACGCGACCG CAAGACCCAG GCCGTGCTGC CCCTGCGCGG CAAGATCCTG AACGTCGCCA GCGCCACCCG GGACAAGCTC GCCCAGAACC AGCAGCTCGC CGACCTCGGC CAGGCGCTGG GCTGTGGCAT GCTCTCCCAT TATCGCGACG CGGATCTGCG GTACGAGAAG GTCATCATCA TGACCGACGC CGACGTGGAC GGCGCGCACA TCGCCTCGCT GCTGGTCACC TTCTTCTTCC GGCAGATGCC GAAGCTGATC GAGGACGGCC ACCTCTTCCT CGCCGTGCCG CCGCTCTACC GCATCACCCA GGGCGCCAAG ACGCTCTATG CGCGGGACGA CGCCCACAAG GAAAAGCTGC TGAAGAAGGA ATTCACCGGC AAGGGCAAGG TGGAGGTGGG CCGCTTCAAG GGTCTCGGCG AGATGATGCC GGCTCAGCTG AAGGAAACCA CCATGGATCC GCGCACGCGC ACGCTCCAGC GTGTCACCAT CGAGGATGCC GAGCAGGCGG CCACCACGGA CCTCGTGGAA CGCCTCATGG GCAACAGGCC CGAGGCGCGC TTCGCCTTTA TCTCCGAGCG CGCCGCCTTC GCCGGCGAGG CCTTGCTCGA CATCTGA
|
Protein sequence | MSQSDDLFGS TPRPKPAGKP AKAAAAAVPA MDADYTAAHI EVLEGLEPVR RRPGMYIGGT DSKALHHLFA EVIDNCMDEA VAGHATFIEV QMAADGYLTV SDNGRGIPVE EHPKFPGKSA LEVIMTTLHA GGKFDSKVYE TSGGLHGVGI SVVNALSDDL EVEVTRNQTL YRQSFSKGVP QGKLKEVGRI TNRRGTRVRF HPDPEIFGPS ARFEPARVFR MARSKAYLFG GVEIRWSCDP ELLKGIEGVP EKTSFRFPGG LRDYLAADLE GQTLVHSDIF SGRIQKPGGH GSVEWAVAWV ADADGSISSY CNTIPTPDGG THENGLRAVL LKGLKDHAER SGQGKRGSVI TGDDVTTGCA AMLSVFVREP EFQGQTKDRL ATAEAARIVE QGLRDPFDHW LAANPVQASR LLEHVIDRAE ERLRRKQEKE VSRKTAVRKL RLPGKLADCS NTEAAGSEIF IVEGDSAGGS AKQARDRKTQ AVLPLRGKIL NVASATRDKL AQNQQLADLG QALGCGMLSH YRDADLRYEK VIIMTDADVD GAHIASLLVT FFFRQMPKLI EDGHLFLAVP PLYRITQGAK TLYARDDAHK EKLLKKEFTG KGKVEVGRFK GLGEMMPAQL KETTMDPRTR TLQRVTIEDA EQAATTDLVE RLMGNRPEAR FAFISERAAF AGEALLDI
|
| |