Gene Xaut_4454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4454 
Symbol 
ID5425248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand+ 
Start bp4945818 
End bp4946429 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content68% 
IMG OID640883718 
ProductXRE family transcriptional regulator 
Protein accessionYP_001419332 
Protein GI154248374 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.561636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.472987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCA AGGAGCGCGG GAACACCCTC GAGACCGGCG CGCAGGTCAT CACCGGCCAG 
CTCGGCAAGA CCATCCAGCG CCTGCGCAAG GCCTATAACC TGTCCCTGTC CGACCTCGCC 
GAGCAGTCGG GCGTGGCGAA ATCCATCATC AGCCAGATCG AGCGCAACGA GACCAACCCG 
ACGCTCGCCA CCGTGTGGCG CCTGTCGCAG GCGCTGGACA TGACGGTGGA GCGGGTGCTC 
GCCTCCTCCG ACGACGCCCC CTTCGTGGAG AAGCTGACCC GCGCCGACAC CCCCATCCTG 
CTGTCGGAGG ACGGGCTGGT GCGGCTCTCC ATCATCGGCT GGATCAAGAC GGTGGAGTGG 
CTGCAATATT ACGATATGGA CGCCGCTCCC GGCGGCGAAC TGGATTCCGA CGGCCACCAG 
CGCGGCTCGG TGGAATGCCT CACCGTGCTC AAGGGCACGC TGGAGGTGGA GGTGGGCGGC 
GTCATCGAGA CGGTGAAGGA GGGCGAGACG GTGCGCTATC GCTGCGACCG CCGCCACGTC 
ATCCGCAACC GCACCGACGC CCCCGCCCGC GCCTTCATGG TGTGCCTGCT GAAGGCCGCC 
GTGCTGGAGT GA
 
Protein sequence
MAVKERGNTL ETGAQVITGQ LGKTIQRLRK AYNLSLSDLA EQSGVAKSII SQIERNETNP 
TLATVWRLSQ ALDMTVERVL ASSDDAPFVE KLTRADTPIL LSEDGLVRLS IIGWIKTVEW 
LQYYDMDAAP GGELDSDGHQ RGSVECLTVL KGTLEVEVGG VIETVKEGET VRYRCDRRHV 
IRNRTDAPAR AFMVCLLKAA VLE