Gene Xaut_4449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4449 
Symbol 
ID5424262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4941306 
End bp4942646 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content67% 
IMG OID640883713 
Productextracellular solute-binding protein 
Protein accessionYP_001419327 
Protein GI154248369 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00843107 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.115126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCATT CGTCCCGACG CGGCGTGCTC ACGGCGCTCG TCGTCTCCGC CTTCGCCGCG 
ACCCTCGCCC AGCCGGCGGC GGCACAGAGC CAGACCCCGA CCCAGATCCA GTGGTGGCAT
GCCATGGCCG GCCCGCTGGG GGAGAAGCTG GAAAAGCTCG CCGCCGATTT CAACGCCACC
CAGGGCGAGT ACAAGATCGT CCCGGTGTTC AAGGGCACCT ATCCCGAGGC CATGACCGGG
GCCATCGCCG CCTTCCGGGC CAAGCAGCAT CCAGCCATCG TGCAGGTGTT CGAGGTGGGC
ACCGCCACCA TGATGAGCGC CAAGGGCGCC ATCTATCCCA CCTACAAGCT GATGGCCGAC
GCCGGCGAGC CGTTCGACCC CAAGGCCTAT CTGCCGGCAG TCACGGGCTA CTACACCGAC
ACCGGCGGCA ACATGCTGTC GTTCCCGTTC AATTCCTCCA CCCCCATCCT CTATGTGAAC
AAGGACCTGT TCCGGAAAGC CGGCCTTGAT CCGGAAACCC CGCCGAAGAC CTGGCCCGAG
GTGGAGGCGG CCGCGCTGAA GGTGCAGGCG GCCGGGGTGC CCTGCGGCTT CACCACCCAG
TGGCCGAGCT GGGTGAATGT CGAGAACCTC TCCGCCTGGC ACAATGTGCC TGTGGGCACG
CTGGAAAACG GGCTGGGCGG CACCGCCACC CGCCTCACCA TCGCCAACCC GCTCACCCAG
AAGCACTGGG AAGCCCTCGC CCGCTGGCAG AAGACGAAGA TCTACGATTA TGGTGGCCGC
CAGTCGAAGG CGGACCCGAA ATTCTTCTCC GGCGAATGCG CCATGAGCAT CGGCTCCTCG
GCGGCGCGGG CGGGCATCCT CGCAAATTCC AAATTCGAGC TGGGCTACGG CATGATGCCC
TACTGGCCCG ACGTTCAGGG CGCGCCGCAG AACGCCATCA TCGGCGGCGC TACCCTGTGG
GTGCTTACCG GCCGGCCGGC CGAGGAATAC AAGGGCGTCG CCAAGTTCTT CGGCTACCTG
TCGCGGCCCG AGGTGCAGGC GTGGTGGCAC CAGAACACGG GCTACCTGCC GATCACGCAG
GCCGCCTACG ACCTCTCTCG CGCCCAAGGC TTCTACGAGA AGAACCCCGG CACCGATGTC
TCCATCCGCC AGATGACGCT GAAGGCGCCC ACCGCCAATT CCAAGGGCCT GCGCTTCGGC
AATTTCCTGC AGATCCGCGA CGTGATCGAG GAGGAACTGG AGGCGACGCT GGCCGGCCAG
AAGACGCCGC AGGCCGCCCT CGCCGCCGCC GAGGCCCGCG GCAACGAGCA ACTGCGGGCG
TTCGAGAAGG CCAATCCGTG A
 
Protein sequence
MVHSSRRGVL TALVVSAFAA TLAQPAAAQS QTPTQIQWWH AMAGPLGEKL EKLAADFNAT 
QGEYKIVPVF KGTYPEAMTG AIAAFRAKQH PAIVQVFEVG TATMMSAKGA IYPTYKLMAD
AGEPFDPKAY LPAVTGYYTD TGGNMLSFPF NSSTPILYVN KDLFRKAGLD PETPPKTWPE
VEAAALKVQA AGVPCGFTTQ WPSWVNVENL SAWHNVPVGT LENGLGGTAT RLTIANPLTQ
KHWEALARWQ KTKIYDYGGR QSKADPKFFS GECAMSIGSS AARAGILANS KFELGYGMMP
YWPDVQGAPQ NAIIGGATLW VLTGRPAEEY KGVAKFFGYL SRPEVQAWWH QNTGYLPITQ
AAYDLSRAQG FYEKNPGTDV SIRQMTLKAP TANSKGLRFG NFLQIRDVIE EELEATLAGQ
KTPQAALAAA EARGNEQLRA FEKANP