Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_4402 |
Symbol | |
ID | 5421253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 4882309 |
End bp | 4883520 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640883666 |
Product | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
Protein accession | YP_001419280 |
Protein GI | 154248322 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAG TGGCGAATCC CTCATGCGTG GCCATTATCG TCGCCGCCGG ACGCGGCACC CGCGCCGGTG GACCGCTGCC GAAGCAATAT CAGGCCATCG GCGGCGAGCC GGTGCTGCGC CGCACGCTGC GCCTTTTCGC GACCCATCCG CAGATCACGG CCGTGCTCGC CGTCATCCAT AGCGATGATT CTGTCCGCTT TGCGGACACG GCCCGCGATC TGCCCAAGAT CTTGGCACCG GCCTTCGGCG GGGCGACCCG CCAGGCGTCT GTCCGCGCGG GGCTGGAAGC CCTTGCCGCC GCATCGTGCA CCAGCCCGGA CCTGGTGCTG GTGCACGATG CGGCGCGCCC CTACACCTCG CCGGACCTCA TCGCCCGCGC TGTGGCGGCG GCGCAGGCCG CGGATGCCGC CATTCCCGTG CTCCCCGTAA CCGACACGGT GAAGCGGGTG GATGCCGCCG GCATCGTGGC CGAGACCTTG GACCGCGCGG CGCTGCGCAC GGTGCAGACC CCGCAGGCGT TCCGCTTCGA CGCCCTGCGC GCCGCCCATG CCGCTGCCGC CGCGGCCGGG GTGGAGACGT TGACCGACGA TGCGGCGGTG ATGGAATGGG CCGGCCAGCC CGTGGCCACC TTCGAAGGCG AGAGCACCAA CGTGAAGCTG ACCACCCCTG AAGACATGAC CCGCGCCGCC GGCGCCTCCT TCGCAGATCT TGGCGACGTG CGCACCGGCA CCGGCTTCGA CGTGCACGCC TTCGGCCCCG GCGACCATGT GATGCTCGGC GGGGTCGCGG TGCCCCACAG CGCCGGCCTC GTCGGCCATT CCGATGCGGA CGTGGGCCTG CACGCCCTCA CCGACGCGCT GCTCGGTGCG CTGTGCGATG GCGACATCGG AGCCCATTTC CCGCCCTCCG ACCCGCAGTG GAAGGGCGCG TCCTCCGACC GTTTCCTTGC CCATGCGGTG GAGAAGGTGA CGGCGCGGGG CGGGCGCATT GCCCATCTCG ACCTCACCCT CATCTGCGAG GCGCCGAAGG TGGGGCCGCA CCGCGACGCC ATCCGCGCCG CCATTTCGCT TATCACCGGC GTGCCCCTCG CCCGCGTTTC GGTGAAGGCG ACCACCACCG AGAAGCTGGG CTTCACCGGC CGGCGGGAGG GCATCGCCGC CATGGCCAGC GCCACCATCC GCCTGCCCTT CGCGGACGAG GCGGAGGGCT GA
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Protein sequence | MSEVANPSCV AIIVAAGRGT RAGGPLPKQY QAIGGEPVLR RTLRLFATHP QITAVLAVIH SDDSVRFADT ARDLPKILAP AFGGATRQAS VRAGLEALAA ASCTSPDLVL VHDAARPYTS PDLIARAVAA AQAADAAIPV LPVTDTVKRV DAAGIVAETL DRAALRTVQT PQAFRFDALR AAHAAAAAAG VETLTDDAAV MEWAGQPVAT FEGESTNVKL TTPEDMTRAA GASFADLGDV RTGTGFDVHA FGPGDHVMLG GVAVPHSAGL VGHSDADVGL HALTDALLGA LCDGDIGAHF PPSDPQWKGA SSDRFLAHAV EKVTARGGRI AHLDLTLICE APKVGPHRDA IRAAISLITG VPLARVSVKA TTTEKLGFTG RREGIAAMAS ATIRLPFADE AEG
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