| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4284 |
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| Symbol | dnaE |
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| ID | 5423402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 4749247 |
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| End bp | 4752699 |
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| Gene Length | 3453 bp |
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| Protein Length | 1150 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640883545 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_001419162 |
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| Protein GI | 154248204 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.166792 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATC CCGGCTTCAT CCATCTTCAC GTCCATTCCT CCTATTCGCT GCTGGAGGGG
GCGCTTTCCA TTGGCAAGCT GGCCGACCTC GTGAAGGCGG ATGCGCAGCC GGCCATTGCG
CTCACCGATA CGGGCAATCT GTTCGGCGCG CTGGAATTCT CCGAGAAGAT GTCGGGCGCC
GGCATCCAGC CCATCGCCGG TGTGTCCCTC GCCCTGGACC TGCCGGAGCC GGCAGGCCCG
CGCGGGGCGA TCCGGCCGAA GCGGCCGCGC ATCGTGCTGC TGGCCCAGTC GGAGCCGGGC
TGGCGCAACC TGATGCGACT GGTCTCCCGC TCATTTCTTG AAACCGCCAG CGAGGACGAG
CCGCGCATCC TGCCCGACTG GCTGGCCGAT GCCCATGACG GCCTCATCGC CCTCACCGGC
GGGCCGGCCG GCCCCATCGA CAAGGCGCTG GTGTCCGGCC ATCCGGAGCT GGCGGCGGAG
CGGCTCGACC TGCTCGCCTC GCTGTTCGGC GACCGGCTCT ATGTGGAAGT TCAGCGCCAC
GACACCGACG CCGAGCGCCT CGCCGAAGCC GGGCTGCTGG AACTGGCCTA TGCCAAGGGC
CTTCCGCTGG TCGCGTCCAA CGAGCCCTTC TTCGCCAGCA AGACCGATTA TGAGGCCCAC
GACGGGCTCC TGTGCATCGC CGAGGGCCGG CTTTTGTCGG AAGGCGACCG GCGCCGGCTG
ACGCCCGAGC ACCGATTCAA GACCCGCGCG GAAATGCTCG CCCTGTTCGC CGACCTGCCC
GAGGCCACGG CCAACACGGT GGAGATCGCC CGGCGCTGCG CCTACCGGGT GCGCACCGTG
AAGCCCATCC TGCCGCGCTT CACCTCGGGT GGAGGGGACG GCGATCCCCT GGCCGAGGAG
GCCGCCGAGC TGGAGCGGCA GGCGAAGGAG GGCCTCGCCC AGCGCCTCGA AAAGCACGGG
CCGGCGCCGG GGCTGGACAT CGCCACCTAT GAGGAGCGGC TCGCCTACGA GCTTTCCGTC
ATCACCAAAA TGAAGTTCCC CGGCTACTTC CTCATCGTGT CGGACTTCAT CAAGTGGGCC
AAGGCCCACG ATATCCCGGT GGGGCCGGGG CGTGGATCGG GCGCCGGCTC GCTGGTGGCC
TATTCGCTCC AGATCACCGA CCTCGATCCG ATCCGGTTCG GCCTGCTGTT CGAGCGGTTC
CTGAACCCGG ACCGCGTGTC CATGCCCGAC TTCGACGTGG ACTTCTGCCA GGAGCGCCGC
GACGAGGTGA TCCACTACGT GCAGGAGCGC TACGGCCGCG CCCAGGTGGC GCAGATCATC
ACGTTCGGTA CGCTGCAGGC GCGCGGCGTG CTCCGGGACG TGGGCCGCGT GCTGGAGATG
CCCTATGGGC AGGTGGACAA GCTGTGCAAG CTGGTGCCGC AGAACCCGGC CAATCCGGTC
ACACTGAAGC AGGCCATCGA GGACGAGCCG CGCCTCCAGG CCTCCCGCGA CCAGGAAGAG
GTGGTCAAGC GCGCCTTCGA CATCGCGGTG AGGCTGGAGG GCCTCAACCG CCACGCCTCC
ACCCATGCCG CGGGCATCGT GATCGGCGAC AGGAAGCTCC ACGAGCTGGT GCCGCTCTAT
CGCGATCCCA AGTCCGACAT GCCGGTCACC CAGTACAATA TGAAATGGGT GGAGCAGGCG
GGCCTGGTGA AGTTCGACTT CCTGGGCCTG AAGACGCTGA CCACCATCGA CAAGGCGGTG
AAGCTGATCC ACCAGCGCGG CATCGATCTG GACATCTCCA AGATCCCGCT GGACGACCCC
AAGACCTACG CCATGTTGGG CAAGGGCGAG ACGGTGGGCG TGTTCCAGGT GGAAAGCGCG
GGCATGCGCC GGGCGCTGGT GGACATGAAG GCCGACCGGG TCGAGGACCT GATCGCCCTC
GTGGCGCTCT ACCGGCCCGG CCCCATGGCC AACATCCCGG TGTATTGCGA CTGCAAGCAC
GGCCGCGCCA AGCCGGACTA TCTCCATCCC ATGCTGGAGC CGTACCTGAA GGAGACGTTC
GGCGTCATCA TCTACCAGGA ACAGGTGATG CAGATCGCCC AGGCCATGGC GGGTTACTCG
CTGGGCGAGG CCGACCTGCT ACGCCGCGCC ATGGGCAAGA AGATCCGCGC CGAGATGGAG
AAGCAGCGCG AGCGCTTCGT CTCCGGCTCC GCTGGGCGGG GCATCGAGAA GGCGCAGGCC
GACACCATCT TCGACCTTCT GGCCAAGTTC GCCGACTACG GCTTCAACAA ATCCCACGCC
GCCGCCTACG CCATCGTCGC CTACCAGACG GCCTGGCTGA AGGCGAACTA CCCCACCGAA
TTCCTCGCCG CCTCCATGAC CCTCGACATG GGCAACACGG ACAAGCTCGC GGAATTCCGG
CAGGAGGCCC AGCGCCTCGG CATCGAGGTG GTGCCGCCTA ATATCAACCT GTCGGCCCGC
GAGTTCGCGG TGAAGGACGG CAAGATCATC TACGCCATGT GCGCCATCAA GGGCGTGGGC
GGGGCGGCCG TGGACGCGCT GGTGGCGGCG CGCGGTGACC GGCCGTTCCG GAGCTTCGCG
GATTTCGCCT CGCGCCTGCC GGTGAAGCTG GTCAACAAGC GCACGCTGGA AAGCCTGATG
GCCGCCGGCT GCTTCGACGT GCTGGAGAAG AACCGCGCCC GGGCGTTTGC CGCCATCGAA
TCCATCGTGG CCGAGGCCCA GCGCGTGGAG GCGAACGCCC AGTCGGGCCA GAACGACATG
TTCGGCTCCG GCCCCTCGGC GGTCTCCCTG CCCATTCCGG AGGTGGCGCC CTGGCTGCCC
TCGGAGCGGC TGCAGAAGGA ATATGACGCC ATCGGCTTCT TCCTCACCGG CCATCCGCTG
GACGATTATG CCGATGCGCT GAAGAAGATG CGGGTGCAGT CCTTCTCGGA CTTCTCCCGC
GCCGTGCGCT CGGGCGCCGC GGCGGGGCGG CTCGCTGCCA CCGTGGTCTC CAAGCAGGAG
CGGCGGACCA AGTCCGGCAC CCGCATGGGC ATCGTCGGCC TCTCCGACCC CTCGGGCCAT
TACGAGGCGG TGATTTTCTC CGAAGGCCTC GCGCATTATC GCGACCTGCT GGAGCCGGGC
ACGCCGCTGC TGATGATGGT GGCAGCCGAG CTGAACGGCG AGGATGTGCG CGTACGCATC
AATTCCTGCG AGAAGCTGGA CCCCGTCACC GCCCGCCACC AGAAGGGCCT GCGCATCTTC
CTGCGCTCCC CCGAGCCCAT CGAGGGCATC GCCCGCCGCC TCGCCGACGG CAAGACCGTG
GATGCGGGCT CCGGCGAGGT CAGCCTGATC CTGATGGTGG AGGATGCCCG GGCCGAGGTG
GAAGTGAGCC TGCCCGGCAA ATATCCCATC TCGCCGCAGA TCGCCGGAGC CATCAAGGCC
ATTCCGGGGG TGGTCGCGAT TGAATCCGCA TAG
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| Protein sequence | MPDPGFIHLH VHSSYSLLEG ALSIGKLADL VKADAQPAIA LTDTGNLFGA LEFSEKMSGA
GIQPIAGVSL ALDLPEPAGP RGAIRPKRPR IVLLAQSEPG WRNLMRLVSR SFLETASEDE
PRILPDWLAD AHDGLIALTG GPAGPIDKAL VSGHPELAAE RLDLLASLFG DRLYVEVQRH
DTDAERLAEA GLLELAYAKG LPLVASNEPF FASKTDYEAH DGLLCIAEGR LLSEGDRRRL
TPEHRFKTRA EMLALFADLP EATANTVEIA RRCAYRVRTV KPILPRFTSG GGDGDPLAEE
AAELERQAKE GLAQRLEKHG PAPGLDIATY EERLAYELSV ITKMKFPGYF LIVSDFIKWA
KAHDIPVGPG RGSGAGSLVA YSLQITDLDP IRFGLLFERF LNPDRVSMPD FDVDFCQERR
DEVIHYVQER YGRAQVAQII TFGTLQARGV LRDVGRVLEM PYGQVDKLCK LVPQNPANPV
TLKQAIEDEP RLQASRDQEE VVKRAFDIAV RLEGLNRHAS THAAGIVIGD RKLHELVPLY
RDPKSDMPVT QYNMKWVEQA GLVKFDFLGL KTLTTIDKAV KLIHQRGIDL DISKIPLDDP
KTYAMLGKGE TVGVFQVESA GMRRALVDMK ADRVEDLIAL VALYRPGPMA NIPVYCDCKH
GRAKPDYLHP MLEPYLKETF GVIIYQEQVM QIAQAMAGYS LGEADLLRRA MGKKIRAEME
KQRERFVSGS AGRGIEKAQA DTIFDLLAKF ADYGFNKSHA AAYAIVAYQT AWLKANYPTE
FLAASMTLDM GNTDKLAEFR QEAQRLGIEV VPPNINLSAR EFAVKDGKII YAMCAIKGVG
GAAVDALVAA RGDRPFRSFA DFASRLPVKL VNKRTLESLM AAGCFDVLEK NRARAFAAIE
SIVAEAQRVE ANAQSGQNDM FGSGPSAVSL PIPEVAPWLP SERLQKEYDA IGFFLTGHPL
DDYADALKKM RVQSFSDFSR AVRSGAAAGR LAATVVSKQE RRTKSGTRMG IVGLSDPSGH
YEAVIFSEGL AHYRDLLEPG TPLLMMVAAE LNGEDVRVRI NSCEKLDPVT ARHQKGLRIF
LRSPEPIEGI ARRLADGKTV DAGSGEVSLI LMVEDARAEV EVSLPGKYPI SPQIAGAIKA
IPGVVAIESA
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