Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_4226 |
Symbol | |
ID | 5422862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 4685481 |
End bp | 4686761 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640883485 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001419104 |
Protein GI | 154248146 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.499264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.926991 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACCAGA TCACCCCCGC TGCCGACACC GCGTCGCGTG ACCTGCCGAA GGCGGCGGGA CACGGCGGCC TCATCGCCGC CGTGTGGCAT CGCAAATGGC GGATCGCCGC CCTTATGCTG GTGCTGGCCG GGGCGGGCTG GGGGCTGCTG CGCTGGCGCG CGGGGCCGGA GGTGGTGGTC TATCCGGTGG TGAAGGCCGA GCTGGTGCGC ACCGTGGTCG CCACCGGCCA TGTGGAGACC CCCTACCGGG TGAGCATCGG CAGCCAGATC ACCGGCACCG TCAAGGAGGT GCTGGTGGAG GAGGGCCAGA GCGTGCGGCA GGGCCAGCCG CTGGTTTCCC TCGACGCCAC CGAGCTTGAG TCCGCAGTGG TGCAGGCCGA GGGCGCCGTG GCCCAGGCCG ACGCCCGCAT GCGGCAGCTG CGCGAACTCA CCAAGCCCGC CGCCGACGAG GCGCAAAAGC AGGCCCGTGC CAACCTCGAC AATGCCCGCG CCGCCTTCGA TCGCGCCGAC AAGCTGGCCA AATCTGGCGC CGGCACCCAG GCGACCCTGG ACGAGGCGAC ACGGGCGCTG AATGTCGCCC TGACGCTGGC GCGCACGGCG GAGCTGCAGG TCTACACCTC AAGTCCCGGC GGCAGCGATT ATGTCATCGC CGAGACCCAG CTGAGCCAGG CCAAGGCGAA CCTTGCCACT GCCCGGGCGC GGCTCGGCTA CGCCACCATC ACCGCCCCGC GCGACGGCGT GCTCATCACC CGCAGCGTGG AGCGCGGCGC CGTGGTGCAG GCGGGCAAGA CGCTGCTGGT GCTGGCGCCG GCCGGCGACA CCCAGCTCGT GGTCCAGATC GACGAGAAGA ACCTCAGCCT GCTCAAGCTC GGCCAGAGCG CGCTGGCGTC CGCCGACGCC TATCCGGACC AGCGGTTCCC CGCGAGCCTT ACCTATATCA ACCCCTCCGT GGACATCACC CGGGCCTCGG TGGAGGTGAA GCTTACGGTG CCCGAACCGC CGGTCTACCT GCGGCAGGAC ATGACCGTTT CCGTGGACAT CGCGGTGGAT CGCCGGCCGG ACGCGGTGGT GGTGCCCGCG CGCACCGTGC ACAGCCCCAC CTCGGCGGCG CCGTTCGTGC TGGTGGCGCG GGACGGGCGG GCGCGGGAGC AGAAGGTCCG CCTCGGCCTG AGGGCCGGCG ACCAGGTTCA GGTGCTGGAG GGGCTCACCC CCGGCGAGGC GGTGCTGCCG GTGGCCTCGG GGGTGCGCGC CGGCCAGCGC ATCCGGCCGG TGTCGCGATG A
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Protein sequence | MDQITPAADT ASRDLPKAAG HGGLIAAVWH RKWRIAALML VLAGAGWGLL RWRAGPEVVV YPVVKAELVR TVVATGHVET PYRVSIGSQI TGTVKEVLVE EGQSVRQGQP LVSLDATELE SAVVQAEGAV AQADARMRQL RELTKPAADE AQKQARANLD NARAAFDRAD KLAKSGAGTQ ATLDEATRAL NVALTLARTA ELQVYTSSPG GSDYVIAETQ LSQAKANLAT ARARLGYATI TAPRDGVLIT RSVERGAVVQ AGKTLLVLAP AGDTQLVVQI DEKNLSLLKL GQSALASADA YPDQRFPASL TYINPSVDIT RASVEVKLTV PEPPVYLRQD MTVSVDIAVD RRPDAVVVPA RTVHSPTSAA PFVLVARDGR AREQKVRLGL RAGDQVQVLE GLTPGEAVLP VASGVRAGQR IRPVSR
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