Gene Xaut_4222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4222 
Symbol 
ID5422192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4675867 
End bp4676775 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content69% 
IMG OID640883481 
ProductLysR family transcriptional regulator 
Protein accessionYP_001419100 
Protein GI154248142 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.79182 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.12833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTGC GCGAACTACA ATATCTCGTC GCCCTGGCCG ACCACCGGAA TTTCCGGCGG 
GCGGCCGAGG CGTGCCTCGT CAGCCAGCCC ACCCTCTCCA CCCAGCTGCG CAAGCTGGAG
GAGGAACTGG GCGTGCCGCT GGTGGAGCGC GCCCCGCGCC GGGTCATGCT CACCCCCGCC
GGCCGTGAGG CGGTGGAGCG GGCGCGGCGC ATCCTCGACG AGGTGGAGCA ATTGAAGGAA
GGCGCCCGCC GCAGCTGCGC GGCGGAGGCC GGCGCCCTCA AGCTCGGCGT GTTCCCGACG
CTGGGGCCTT ACCTTCTGCC CCATGTGGTG CCCCTCATCC GCGCCCGCTT CCCGGAGCTG
GAGCTGCTGC TGTTCGAGGA GAAGAGCGCT GCCCTCATCT CCCGGCTGAA CTACGGCACG
CTGGATGCCG CCTTCCTGGC GCTGCCGGTG CACGACAGCC ATTTCCATGC CGAGTTCCTG
TTCGAGGAGC CGTTCCTCCT CGCCGTTCCC GGCACCCATG CGCTGGCCAG CCGCGACAAC
CTCTCCATCA CCGAGCTGTC TCGCTACAAT CTGATGCTGC TGGAGGATGG CCACTGCCTG
CGCGACCAGG CGCTGGACGT GTGCCAGATG GCCGGGGCGC GGGAGAAGTC CGAATTCCGC
GCCACCAGTC TGGAGACCCT GCGCCAGATG GTGGCGGCGG GGGTGGGCAT GACGCTGCTG
CCCATGCTGG CGACCCGCAC CCCATCCCAG CCGGCCGAGA ACATCCACCT CCTGGAATTC
AGCGATTCCA AGCCCAGCCG GCAGATCGCC ATGCTCTGGC GCAAGACCTC CGCCATGGGC
CGGCTTCTGG CCGATGTGGC GCAGGTGTGC CGCACCCTGC CGCAGGAGCT GCTGGCGCCT
CGGCATTGA
 
Protein sequence
MTLRELQYLV ALADHRNFRR AAEACLVSQP TLSTQLRKLE EELGVPLVER APRRVMLTPA 
GREAVERARR ILDEVEQLKE GARRSCAAEA GALKLGVFPT LGPYLLPHVV PLIRARFPEL
ELLLFEEKSA ALISRLNYGT LDAAFLALPV HDSHFHAEFL FEEPFLLAVP GTHALASRDN
LSITELSRYN LMLLEDGHCL RDQALDVCQM AGAREKSEFR ATSLETLRQM VAAGVGMTLL
PMLATRTPSQ PAENIHLLEF SDSKPSRQIA MLWRKTSAMG RLLADVAQVC RTLPQELLAP
RH