| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4149 |
|---|
| Symbol | |
|---|
| ID | 5423022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 4591448 |
|---|
| End bp | 4592752 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640883406 |
|---|
| Product | putative urea short-chain amide or branched-chain amino acid uptake ABC transporter |
|---|
| Protein accession | YP_001419028 |
|---|
| Protein GI | 154248070 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGGTT TGCTGGGACA GGCGACCAAG GGTTTCGGGG CGCTCGCCGC CGCCGCCGCC
ATCGTCGGTA CGATGGGAAT GGGCGTGGCG AAGGCGCAGG AGACCATCAA AGTCGGCATC
CTGCATTCAT TGTCGGGCAC CATGGCCATC AGCGAGACTA CGCTGAAGGA CGCGATGCTC
ATGCTCATCG AAGAGCAGAA CAAGAAGGGC GGCATCCTGG GCAAGAAGCT CGAGGCCGTC
GTGGTGGATC CCGCTTCCAA CTGGCCGCTG TTCGCCGAAA AGGCGCGCGA GCTGATCACC
AAGGACAAGG TCGCTGCCGT GTTCGGCTGC TGGACCTCGG TCAGCCGCAA GTCGGTGCTG
CCGGTGTTCA AGGAACTCAA CAACATCCTC TTCTACCCGG TGCAGTATGA GGGCGAGGAG
AGCGAGCGCA ACGTCTTCTA TACCGGTGCT GCTCCGAACC AGCAGGCCAT TCCTGCGGTT
GACTACCTCG CCAACGAGGA GAAGGTGGAA CGCTGGGTGC TCGCGGGCAC CGACTATGTC
TATCCCCGCA CCACCAACAA GATCCTGGAA GCCTACCTGA AGTCCCGCGG CGTGAAGGCC
GAGGACATCA TGATCAACTA CACGCCGTTC GGTCATTCCG ACTGGCAGAC CATCGTGTCC
GATATCAAGA AGTTCGGCTC GGCGGGCAAG AAGACGGCAG TAGTATCCAC CATCAACGGT
GACGCCAACG TGCCGTTCTA CAAGGAACTG TCCAACCAGG GCATCAGCGC CAAGGACATT
CCGGTCGTCG CCTTCTCGGT GGGCGAGGAA GAGCTGGCGG GCATCGACAC CAAGCCGCTC
GCCGGTCACC TCGCGGCATG GAACTACTTC ATGTCCATCG ACACGCCGGA GAACAAGGAG
TTCATCGCCA AGTGGCACGC CTTCACCAAG GATCCCAAGC GCGTCACCAA TGATCCCATG
GAGGCCCACT ATATCGGCTT CAACATGTGG GTGAAGGCGG TGGAGAAGGC CGGCACGACC
GACCAGGACA AGGTCATCGC CGCGCTGCCG GGCATCAAGC AGGCCAACCT TACCGGCGGC
GTCTCGGAGA TGCTTCCCAA CCACCACATC ACCAAGCCCG TCTTCATCGG TGAGATCGAA
GGCAACGGCC AGTTCGACGT GGTGTGGAAG ACCAAGGACC TCATCCCCGG CGAAGCCTGG
TCGCGCTACC TCGAAGGCTC CAAGAGCCTG GTGGCCGATT GGGTGAAGCT GAACTGCGGT
AACTTCGACA CCGTCAAGAA CGTCTGCCTC TCGGCGGCCA AGTAA
|
|---|
| Protein sequence | MLGLLGQATK GFGALAAAAA IVGTMGMGVA KAQETIKVGI LHSLSGTMAI SETTLKDAML
MLIEEQNKKG GILGKKLEAV VVDPASNWPL FAEKARELIT KDKVAAVFGC WTSVSRKSVL
PVFKELNNIL FYPVQYEGEE SERNVFYTGA APNQQAIPAV DYLANEEKVE RWVLAGTDYV
YPRTTNKILE AYLKSRGVKA EDIMINYTPF GHSDWQTIVS DIKKFGSAGK KTAVVSTING
DANVPFYKEL SNQGISAKDI PVVAFSVGEE ELAGIDTKPL AGHLAAWNYF MSIDTPENKE
FIAKWHAFTK DPKRVTNDPM EAHYIGFNMW VKAVEKAGTT DQDKVIAALP GIKQANLTGG
VSEMLPNHHI TKPVFIGEIE GNGQFDVVWK TKDLIPGEAW SRYLEGSKSL VADWVKLNCG
NFDTVKNVCL SAAK
|
|---|
| |