| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4127 |
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| Symbol | |
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| ID | 5424898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 4567258 |
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| End bp | 4569225 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640883383 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001419006 |
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| Protein GI | 154248048 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0457] FOG: TPR repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.248641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.206732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCCCG AAGTCTCAAG CGCGCTCGCT CGCGCGGCCG ACCTGCACAG GATGGGGCAT
TTCGAACAGG CGCTCGCGAT CTATCGCCGG CTTGCGAAAG CGCATTCCGC CTCATTCGAC
ATCCAGCGCC TGTTGATTTT CGAGCTGCTG CAAGTGGGAC GGCCCAAGGA GGCCGTGATT
GCGGCGCGTC GCCTTGGGGA CGCTCATCCG CGCAATCCCC ATGCGGCGAT CCTGCTTGGT
GCCAGCCACC AGGGCCTGGG CAACTGGGAG AAGGCGCTTG CCGCCTTCCA GGTTGCTCTC
AGCCTTGAGG GCGCGCCCCT GGAGGCACGC TTTCTGGCTG GCAATGCGTT TTGCGCCCTC
GGCCGATATG CGGAGGGCGT GGCCTGCTAC GACGCCGTCC TGGCGGCGGA TGCCCGGTCG
ATCGAAGCGC TCTCCAACCG CGCCGGCGCC CTTGCGCGCC TCGGCCGGCT GGAGGAGGCG
CTGCGCGACA GCGAAGCGCT TGTCGCCCTG CAGCCCTGGC AGCCGCTGCA TCTCGTCAAT
CTGGCGGGGA CCTTGCTGGA ACTTCAGCGC TCCCGGGATG TCATAGCCGC GGCCGATGCC
GCGCTTCGCC TGGCCCCTGG GCTTGCGGAT GCCGAATATC TGCGCGGGCA GGCCCTGCTG
GGACTGGGCA AGTGGGCCGA GGCGCGTGTC AGCCTGGAAA AGGCTGTCGA CCTGGCGCCT
CAGAACACCG CATTCCACGT GCGCCTGATT TCCGTCCTGC ATCTTCTTGA GGACCTGCCC
GCAGCGCGCA GCGCCTGCGA CCGCGCCGTT GTTCTCGACC CGAAATCAGC CCTGCTTTTC
CAGCTTCGCG CGGAAATTCG CCGGGCGCAG GACGATGCTT CCGGTGCCAT GGCCGATGTG
GAAGCTGCGC TCGCGCTCGA TCCGCGACTG GCATCCGCGC ACGTGTCGCG CGCCCGTCTG
ATGGCGGATG ACGGCCGCCG GGCAGACATG CGCAAGGCCC TCGGGCGTGC CTTGGAAGTC
GATCCTCGGC GGTCCTATGT CTTGTATGCA AATGCGCAGG AAAAACTCGC CCAGGGACAG
TGGCTGGAGG GCTGGGCGGG ATACGAGCAT CGCGAAGGGA TACTGCCGCC GCCCTTCAAC
CCGCTTCCGT TCACGCGCTG GGACGGAGGG GAAACGCCGG AAATGCTGGT TGTTCTGGGC
GAGCAGGGGA TAGGGGACGT GATCTTCTTC GGCCGCCTTC TGCGCCTTCT GGCGGATCGC
GGGATCAGCA CCGTCCTGCT CACGAGGCCG GGTCTCGTCC CGTTGCTTCG AGACCTCGAC
GGCCGGGTGC CGGTCGTCTC CGATCTATCG GGAATAGACC AGTCGATGCA GGGCCTGCGC
TGGGCTCCCA TCGGCAGCCT GCCGCATCTT GTGTCCCCCG ACCCGGCCCA GTGGCCTGCC
GCGCCCTATC TCACCGCGCC GCAGGACCGG GTTTCCAGAT GGCGCCACCT GCGCCGCGAT
GGCGCTTTCA ACATAGGCAT CAACTGGCAG GGCAATCCGT CGCGCAACGT GGATGTGGGA
CGCTCGATGC CCCTGGCGCA TTTCGCCCCG CTGGCCGAGA TTCCGGGCGT GAGCCTTGTG
TCGCTTCAGC ACGGAGCAGG CAGCGAGCAG TTGGACCAGG TGCCATTTGC AGGCGCGATC
GTGCGGCCTG ACGCGGGCTT TAACGCGGAC GGCATCTTTA TCGACACGGT CGGCCTGATG
CAGACCCTCG ACCTGGTCGT CACCACCGAC ACCGCGCTCG CGAATCTGGC GGGCGCCTGC
GGCCTTCTCA CCTTCGTCGC CCTGCGGGCC ATACCCGATT GGCGGTGGGG ATGTGAGGGC
GAGGAAACCG TCTTCTTTCC GAGCCTCCGT CTGTTCCGGC AGCAGATAGC AGGAGACTGG
TCGAGCCTAA TGGAGCGTAT GGCTCATAAA ATACGAGAGC TGATGTAG
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| Protein sequence | MSPEVSSALA RAADLHRMGH FEQALAIYRR LAKAHSASFD IQRLLIFELL QVGRPKEAVI
AARRLGDAHP RNPHAAILLG ASHQGLGNWE KALAAFQVAL SLEGAPLEAR FLAGNAFCAL
GRYAEGVACY DAVLAADARS IEALSNRAGA LARLGRLEEA LRDSEALVAL QPWQPLHLVN
LAGTLLELQR SRDVIAAADA ALRLAPGLAD AEYLRGQALL GLGKWAEARV SLEKAVDLAP
QNTAFHVRLI SVLHLLEDLP AARSACDRAV VLDPKSALLF QLRAEIRRAQ DDASGAMADV
EAALALDPRL ASAHVSRARL MADDGRRADM RKALGRALEV DPRRSYVLYA NAQEKLAQGQ
WLEGWAGYEH REGILPPPFN PLPFTRWDGG ETPEMLVVLG EQGIGDVIFF GRLLRLLADR
GISTVLLTRP GLVPLLRDLD GRVPVVSDLS GIDQSMQGLR WAPIGSLPHL VSPDPAQWPA
APYLTAPQDR VSRWRHLRRD GAFNIGINWQ GNPSRNVDVG RSMPLAHFAP LAEIPGVSLV
SLQHGAGSEQ LDQVPFAGAI VRPDAGFNAD GIFIDTVGLM QTLDLVVTTD TALANLAGAC
GLLTFVALRA IPDWRWGCEG EETVFFPSLR LFRQQIAGDW SSLMERMAHK IRELM
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