| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4079 |
|---|
| Symbol | |
|---|
| ID | 5423121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 4513729 |
|---|
| End bp | 4514946 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640883334 |
|---|
| Product | ABC-type branched-chain amino acid transport system, periplasmic component |
|---|
| Protein accession | YP_001418958 |
|---|
| Protein GI | 154248000 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.23084 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTAA AGGGTTTTTG CGCGGGCCTC ATCGGCGCCG CGCTGCTGGC GGCTGCCGGC
ACGGCGGCGG CTGAGGTGCC GGCGCGGGGC ATCAAGGTGG GCGTGCTCAC CGACCTCAGC
GGCGTCTACA CCGACCTCGT GGGGCAAGGC TCCATCGAGG CCGCGAAGAT GGCGGTGGAG
GATTTCGGCG GCTCCATCGA CGGCAAGCCC ATCACCATCG TCTCCGCCGA CGGGCAGAAC
AAGGCGGACG TGGGCGCCTC CATCGCCCGG CGCTGGATCG ACGAAGACAA TGTGGACGTG
ATCGTGGACG TGCCCAACAC CGCCATCGCC CTCGCGGTGC AGGAGATCAC CCGCGCCAAG
AACAAGGTGC TGCTGAACAC CGGCGCCGGC TCCACGGTCT TCACCAACAA GGCCTGCTCG
CCCACCTCGT TCCACTGGGT CTATGATTCC TACGCCATGG CCAACGGCAC CGCTCGCTCG
GTGGTCGCCG AGGGCGGCGA CAGCTGGTAC TTCCTGACGG CGGACTACAC CTTCGGCCAG
TCGCTGGAGC GCGACGCCTC CGAGGTCGTC CGCGCCAACG GGGGCAAGGT GCTCGGCTCG
GTGCGCCATC CACTGGGCAG CTCGGATTTC TCGTCCTTCC TGCTGCAGGC ACAGGCCTCC
GGGGCGAAAG TCATCGCCTT CGCCAACGGC GGGGCGGACC TCATCAATTC CATCAAGCAG
GCCCATGAAT TCGGTATCGG CAGCGACAAG CAGCGCCTCG CGGCCATGGT CATCTTCATC
ACCGACATCC ACGCCCTCGG CCTCGCCCAG GCGCAGGGCC TGCTGCTGAC CTCCGGCTTC
TACTGGGACA TGGATGCGCA GAACCGCGCG TGGTCGGAAC GCTGGGCCAA GCGCATGGGC
GGCCGCAAGC CCACCATGCT GCATGCCGGC GTCTATTCGG CGGTGCTGCA CTTCCTGCGC
TCGGCCAAGG CCGCCAATTC GGTGGAGGGC AATGTGGTGG CCGACAAGAT GCGCGAACTG
CCCATCGACG ATTTCTTCGC CCGCAACGGC TCAATCCGCC CCGACGGCAG GATGATCCAC
GACATGTATC TGGCGCAGGT GAAGACGCCG GCCGAATCCA AGGGACCGTG GGACTATCTG
AAGATCGTCC GCACCATTCC GGCGGCCGAG GCCTTCCAGC CCCTGTCGCG CAGCGAATGC
CCGCTGGTGA AGAAATGA
|
|---|
| Protein sequence | MAVKGFCAGL IGAALLAAAG TAAAEVPARG IKVGVLTDLS GVYTDLVGQG SIEAAKMAVE
DFGGSIDGKP ITIVSADGQN KADVGASIAR RWIDEDNVDV IVDVPNTAIA LAVQEITRAK
NKVLLNTGAG STVFTNKACS PTSFHWVYDS YAMANGTARS VVAEGGDSWY FLTADYTFGQ
SLERDASEVV RANGGKVLGS VRHPLGSSDF SSFLLQAQAS GAKVIAFANG GADLINSIKQ
AHEFGIGSDK QRLAAMVIFI TDIHALGLAQ AQGLLLTSGF YWDMDAQNRA WSERWAKRMG
GRKPTMLHAG VYSAVLHFLR SAKAANSVEG NVVADKMREL PIDDFFARNG SIRPDGRMIH
DMYLAQVKTP AESKGPWDYL KIVRTIPAAE AFQPLSRSEC PLVKK
|
|---|
| |