Gene Xaut_4048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_4048 
Symbol 
ID5424014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp4478018 
End bp4479397 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content71% 
IMG OID640883302 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001418927 
Protein GI154247969 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.650008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.353812 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGCTG AGCGCGCCCT CAAGTCCACT CCCGCCCCGC ACCCGGCCGC CCGGCCCCGC 
GTGGTGCTGG TGGACGACGA GGAGATGATC CGCATCACCA TCGAGCAGAC GCTGGAACTG
GCCGGCATCG CGGTCGAGAC CTTCGACAGC GTGGATGCGG CCCTGCCCGC CATCGGCCGC
GACTTTCCCG GCGTGGTGGT GAGCGACGTG CGCATGCCGG TGCGCGACGG GCTGGAACTG
CTGGCGGACG TGCGCCGGCG CGATCCCGAA TTGCCGGTGG TGCTCATCAC CGGGCATGGG
GACGTGGCCA TGGCGGTAAG CGCCATGCGC GAGGGCGCCT ATGATTTCAT CGAGAAGCCG
TTCGTCTCCG ACGCCTTCGT GGAGGTGGTG CGCCGCGCCC TCGACAAGCG CGCCCTCGTG
ATGGAAAACC GCCGCCTGCG TATGGCGCTG GACCGGGGCG AGGCGGGCGA CGCCATCGAG
CGCTGCCTCG TCGGCCAGTC CCCCGCCATC CGCCGGCTGC GGGACGACGT GGCGCAGCTC
GCCTCCACCA GTGCCGACGT GCTGGTGCTG GGCGAGACCG GCGCCGGCAA GGAGCAGGTG
GCCCGCGCCC TGCACGAGGG CGGATCGCGG CGCGACAAGC CGTTCGTGGC GGTCAATTGC
GGCGCCATCC CCGAAAGCAT GTTCGAGAGC GAGATGTTCC GCCACGAGGC CGGCGCCTTC
ACCGGTGCCG GCAAGAAGCG CATCGGCAAG ATCGAGCACG CGAGCGGAGG CACCCTCTTC
CTCGACGAGG TGGAGAGCAT GCCGCTCGCC ATGCAGGTGA AGCTGTTGCG CGTGCTGCAG
GACCGCAAGA TCGAACGGCT CGGCTCCAAC ACCGCCGTGC CGGTGGACCT GCGCGTGATC
GCCGCCACCA AGGAGGACCT TGCCGCCCTC GCCGACGCCG GCCGCTTCCG CAAGGATTTG
TGCTTCCGCC TCGACGTGGT GAAGCTGGTG CTGCCGCCGC TGCGCGAGCG GCGGGAGGAC
ATTCCCCTGC TGTTCGAGCT GTTCGTGGTG CAGGCGGCGG TGAAGTACCA GCGGCCGGTG
ACGGAAGTTC CCCCATCCCT GCGCCGTGCG CTCATGCTGG CCGACTGGCC GGGCAACGTG
CGCGAGCTGA AGAACGCCGC CGAGCGCCAC ATCCTGGGCT TCCTCGCCCC CGATTTCGCC
GCCGGCGGGG CCGCGACCCC CGGCCTCAAC GAGTTGCTGG ACCGGGTGGA GCGCCTCGTG
ATCGAGGATG CGCTCAAAGC GTCGGGCCAG CGCATCTCGG CGGCGGCGCA GGCCCTCAAC
ATCCCCCGCA AGACCCTCTC CGACCGCATG AAGCGGCTCG GCCTCACCGC CGCGGAGTGA
 
Protein sequence
MCAERALKST PAPHPAARPR VVLVDDEEMI RITIEQTLEL AGIAVETFDS VDAALPAIGR 
DFPGVVVSDV RMPVRDGLEL LADVRRRDPE LPVVLITGHG DVAMAVSAMR EGAYDFIEKP
FVSDAFVEVV RRALDKRALV MENRRLRMAL DRGEAGDAIE RCLVGQSPAI RRLRDDVAQL
ASTSADVLVL GETGAGKEQV ARALHEGGSR RDKPFVAVNC GAIPESMFES EMFRHEAGAF
TGAGKKRIGK IEHASGGTLF LDEVESMPLA MQVKLLRVLQ DRKIERLGSN TAVPVDLRVI
AATKEDLAAL ADAGRFRKDL CFRLDVVKLV LPPLRERRED IPLLFELFVV QAAVKYQRPV
TEVPPSLRRA LMLADWPGNV RELKNAAERH ILGFLAPDFA AGGAATPGLN ELLDRVERLV
IEDALKASGQ RISAAAQALN IPRKTLSDRM KRLGLTAAE