Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_4048 |
Symbol | |
ID | 5424014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | - |
Start bp | 4478018 |
End bp | 4479397 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640883302 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001418927 |
Protein GI | 154247969 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.650008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.353812 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTGCTG AGCGCGCCCT CAAGTCCACT CCCGCCCCGC ACCCGGCCGC CCGGCCCCGC GTGGTGCTGG TGGACGACGA GGAGATGATC CGCATCACCA TCGAGCAGAC GCTGGAACTG GCCGGCATCG CGGTCGAGAC CTTCGACAGC GTGGATGCGG CCCTGCCCGC CATCGGCCGC GACTTTCCCG GCGTGGTGGT GAGCGACGTG CGCATGCCGG TGCGCGACGG GCTGGAACTG CTGGCGGACG TGCGCCGGCG CGATCCCGAA TTGCCGGTGG TGCTCATCAC CGGGCATGGG GACGTGGCCA TGGCGGTAAG CGCCATGCGC GAGGGCGCCT ATGATTTCAT CGAGAAGCCG TTCGTCTCCG ACGCCTTCGT GGAGGTGGTG CGCCGCGCCC TCGACAAGCG CGCCCTCGTG ATGGAAAACC GCCGCCTGCG TATGGCGCTG GACCGGGGCG AGGCGGGCGA CGCCATCGAG CGCTGCCTCG TCGGCCAGTC CCCCGCCATC CGCCGGCTGC GGGACGACGT GGCGCAGCTC GCCTCCACCA GTGCCGACGT GCTGGTGCTG GGCGAGACCG GCGCCGGCAA GGAGCAGGTG GCCCGCGCCC TGCACGAGGG CGGATCGCGG CGCGACAAGC CGTTCGTGGC GGTCAATTGC GGCGCCATCC CCGAAAGCAT GTTCGAGAGC GAGATGTTCC GCCACGAGGC CGGCGCCTTC ACCGGTGCCG GCAAGAAGCG CATCGGCAAG ATCGAGCACG CGAGCGGAGG CACCCTCTTC CTCGACGAGG TGGAGAGCAT GCCGCTCGCC ATGCAGGTGA AGCTGTTGCG CGTGCTGCAG GACCGCAAGA TCGAACGGCT CGGCTCCAAC ACCGCCGTGC CGGTGGACCT GCGCGTGATC GCCGCCACCA AGGAGGACCT TGCCGCCCTC GCCGACGCCG GCCGCTTCCG CAAGGATTTG TGCTTCCGCC TCGACGTGGT GAAGCTGGTG CTGCCGCCGC TGCGCGAGCG GCGGGAGGAC ATTCCCCTGC TGTTCGAGCT GTTCGTGGTG CAGGCGGCGG TGAAGTACCA GCGGCCGGTG ACGGAAGTTC CCCCATCCCT GCGCCGTGCG CTCATGCTGG CCGACTGGCC GGGCAACGTG CGCGAGCTGA AGAACGCCGC CGAGCGCCAC ATCCTGGGCT TCCTCGCCCC CGATTTCGCC GCCGGCGGGG CCGCGACCCC CGGCCTCAAC GAGTTGCTGG ACCGGGTGGA GCGCCTCGTG ATCGAGGATG CGCTCAAAGC GTCGGGCCAG CGCATCTCGG CGGCGGCGCA GGCCCTCAAC ATCCCCCGCA AGACCCTCTC CGACCGCATG AAGCGGCTCG GCCTCACCGC CGCGGAGTGA
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Protein sequence | MCAERALKST PAPHPAARPR VVLVDDEEMI RITIEQTLEL AGIAVETFDS VDAALPAIGR DFPGVVVSDV RMPVRDGLEL LADVRRRDPE LPVVLITGHG DVAMAVSAMR EGAYDFIEKP FVSDAFVEVV RRALDKRALV MENRRLRMAL DRGEAGDAIE RCLVGQSPAI RRLRDDVAQL ASTSADVLVL GETGAGKEQV ARALHEGGSR RDKPFVAVNC GAIPESMFES EMFRHEAGAF TGAGKKRIGK IEHASGGTLF LDEVESMPLA MQVKLLRVLQ DRKIERLGSN TAVPVDLRVI AATKEDLAAL ADAGRFRKDL CFRLDVVKLV LPPLRERRED IPLLFELFVV QAAVKYQRPV TEVPPSLRRA LMLADWPGNV RELKNAAERH ILGFLAPDFA AGGAATPGLN ELLDRVERLV IEDALKASGQ RISAAAQALN IPRKTLSDRM KRLGLTAAE
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