| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4042 |
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| Symbol | |
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| ID | 5424585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 4470151 |
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| End bp | 4470936 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640883296 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001418921 |
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| Protein GI | 154247963 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR02415] acetoin reductases |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.329693 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0184559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGTC TGAAGGACAA GAGCATCGTC ATCACCGGCG CGGCCGGCGG CATCGGCGCC
GCCATCGCGA AAGCCCTTGC GGCGGACGGC GCCCGCATCA CTGTGGCCGA CCTCTCGGAG
CCCGCCGCCC GCGCGGTGGC CGGGGAGATC ACGGCCGCCG GCGGCACCGC CATCGCGGTT
GCGGTGGATG TGCGCCAGCG GGCGCAGGTG CGCGCCCTGC TCGATGAGGC CGTGGCCGCC
CATGGCCGGC TCGACGTGCT GTTCAACAAT GCCGGCGTGG CCCAGACCCG GCCCTTTCTC
GACATCACGG AAGACGACTG GCGCTTCGTC ACCGACGTGA ACGCGCTGGG CGTGCTCATC
GGCATGCAGG AGGCCATCAA GACGTTCAAA AGACAGGGCG GCGGCGGCAA GATCGTCAAC
ACTGCCTCCA TCGCCGCCAA GCAGGGCTAC GAGCCGCTGG CCCATTATTG CGCCAGCAAG
TTCGCCGTGG TGGCCTTGAC CCAGGCGGCG GCGCGCGCCT TCGGCAAGGA TCAGATCACC
GTCAACGCCT TCTGCCCCGG CGTGGTCGCC ACCGACATGT GGAAGATCAT CGACAAGGGC
TTCCGCGACA GCGGCCTCAC CAGCGCCGAC AACGAGGCGT TCGACACCTT CGCCGCCGGC
GCCGTGCTGG GCCGGCCCTC CACCCCGGCG GACCTCGTGG GGGTGGCGCG TTTCCTCGCC
TCCTCCGCCT CCGACTTCAT GACCGGCCAG TCCCTGCTGG TGGACGGCGG CATGGTCTTC
ACCTGA
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| Protein sequence | MPSLKDKSIV ITGAAGGIGA AIAKALAADG ARITVADLSE PAARAVAGEI TAAGGTAIAV
AVDVRQRAQV RALLDEAVAA HGRLDVLFNN AGVAQTRPFL DITEDDWRFV TDVNALGVLI
GMQEAIKTFK RQGGGGKIVN TASIAAKQGY EPLAHYCASK FAVVALTQAA ARAFGKDQIT
VNAFCPGVVA TDMWKIIDKG FRDSGLTSAD NEAFDTFAAG AVLGRPSTPA DLVGVARFLA
SSASDFMTGQ SLLVDGGMVF T
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