| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3993 |
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| Symbol | |
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| ID | 5423887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 4422170 |
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| End bp | 4422859 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640883248 |
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| Product | conjugal transfer protein TrbF |
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| Protein accession | YP_001418873 |
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| Protein GI | 154247915 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3701] Type IV secretory pathway, TrbF components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0169499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.104606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCT TCAAGCGCCC GTCGGTCCAT TACGGCCGCT CCCCCGAGCC TGAGACGCCG
TATCAGCGCG CGGCCCAGGT CTGGGATGAC CGCATCGGCT CGGCCCGGGT CCAGGCGAAG
AACTGGCGCC TCATGGCCTT CGGCTGCCTC GCCCTGTCGG CCGGCCTCTC CTGCGCCCTG
GCGTGGCAGG CCCTGAGCGG CTCGGTGGTT CCGTGGGTGG TTCAGGTGGA CAAGCTCGGT
CAGGCGCAGG CGGTCGCGCC GGCCGCCTCG GACTATCGCC CCTCCGATCC CCAGATCGCC
TTCCACCTCG CCCGCTTCAT TGAAGAGGTC CGCAGCATCT CTGCCGATCC CGTGATCGTC
CGCCAGAACT GGCTCAGGGC CTACGCCTAC ACGACCCTGG CCGGAGCAAT CGCCCTCAAC
GACTATGCCC GCGCCAATGA TCCTTTCGCC CGGGTCGGCA AGCAGCAGGT GGCGGTGGAG
GTCTCCAGCG TGATCCGGGC CTCGCCGGAC TCCTTCCGCA TCGCCTGGAC CGAGCGCCGC
TTCCAGGACG GCAGCCTCGC CGACACCTCC CGCTGGAGCG CCATCCTCAC CGTCGCGGTG
CAGGCGCCGC GGGATGCGGA TCGGCTCCGG GCCAATCCGC TGGGGATCTA CGTCAACGCC
ATCAACTGGT CGAAGGAACT CGCACAATGA
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| Protein sequence | MTPFKRPSVH YGRSPEPETP YQRAAQVWDD RIGSARVQAK NWRLMAFGCL ALSAGLSCAL
AWQALSGSVV PWVVQVDKLG QAQAVAPAAS DYRPSDPQIA FHLARFIEEV RSISADPVIV
RQNWLRAYAY TTLAGAIALN DYARANDPFA RVGKQQVAVE VSSVIRASPD SFRIAWTERR
FQDGSLADTS RWSAILTVAV QAPRDADRLR ANPLGIYVNA INWSKELAQ
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