| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3905 |
|---|
| Symbol | |
|---|
| ID | 5422365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 4322113 |
|---|
| End bp | 4323279 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640883161 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_001418786 |
|---|
| Protein GI | 154247828 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.504593 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.521585 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGCG GAGTTTCACT GGGAGGCGGA CCGGTGTTCC GCTCCCGGAC GAAAGGGAGA
GACCTGATGA AGAAGCTCTT GATGGCGTCG CTCGCTCTGG GCGCCAGCCT TCTGCTTGCG
GCTGAGGCCC AGGCGCAGGT GAAGATGGGC GTCGGCGGTC CCATGACCGG CGCGAATGCT
GCCTTCGGCG CCCAGCTGAA GACCGGCGCC GAGCAGGCCG TGGCCGACAT CAACGCCGCC
GGCGGCATCC TCGGCCAGAA GATCCAGCTC TCGGTTGGCG ACGACGGCGG CAAGCCCGAG
CAGGGCAAGT CTGCGGCCAA CAAGTTCATC TCCGACGGCG TCAAGTTCGT GGTCGGCCAC
TTCAACTCCG GCGTGTCGAT CCCGACTTCG CAGGATTACG AGGAAGCCGG CGTCCTCCAG
ATCAGCCCCG CCTCCACCAA CCCGACCTTC ACCGAGCGCA AGATGTGGAA CACGTTCCGC
ACCTGCGGCC GGGACGACCA GCAGGGCGCG GTGGCCGGCG CCTATATCGT CAAGAACTTC
AAGGGCAAGA AGGTCGCCAT CGTCCACGAC AAGACCCCCT ACGGCAAGGG TCTGGCGGAC
GAGACGCAGA AGACCATCAA CAAGGGCGGC GTGAAGGAAG TCCTCTATGA GGGCATCAAT
CCCGGCGAGA AGGACTATTC GGCCCTCGTC TCCAAGCTGA AGGCCAATGG CGTCGACCTG
CTCTACTACG GCGGCCTGCA TCCCGAGGCC GGCCTTCTGG TACGTCAGAT GCGCGACCAG
GGCATGAAGA CTGTGCTGTT CTCTGGCGAC GGCATCACCG ACAAGGAATA CTGGACCATC
GCCGGTCCCG GCGCCGAGGG CACGCTGATG ACCTTCGGCC CCGATCCGCG CAACAATCCG
GCGGCCAAGG ACATCGTCGC CGCCTTCAAG GCCAAGGGCG TGGATCCGGA AGGTTACGTG
CTCTACTCCT ATGCCGCGGT GCAGGTGATG AAGCAGGCGG CCGAGGCGGC CAAGTCCCTC
GATCCCAAGA AGGTGGCCGC CGAGATCCAT TCCGGCAAGA CCTTCAACAC CGTGCTCGGC
CCGCTCTCCT TCGACAAGAA GGGCGACATC ACCAAGCTCG ACTATGTGGT CTACGTCTGG
AAGGACGGCG CCTACACCCA GCTCTGA
|
|---|
| Protein sequence | MRRGVSLGGG PVFRSRTKGR DLMKKLLMAS LALGASLLLA AEAQAQVKMG VGGPMTGANA
AFGAQLKTGA EQAVADINAA GGILGQKIQL SVGDDGGKPE QGKSAANKFI SDGVKFVVGH
FNSGVSIPTS QDYEEAGVLQ ISPASTNPTF TERKMWNTFR TCGRDDQQGA VAGAYIVKNF
KGKKVAIVHD KTPYGKGLAD ETQKTINKGG VKEVLYEGIN PGEKDYSALV SKLKANGVDL
LYYGGLHPEA GLLVRQMRDQ GMKTVLFSGD GITDKEYWTI AGPGAEGTLM TFGPDPRNNP
AAKDIVAAFK AKGVDPEGYV LYSYAAVQVM KQAAEAAKSL DPKKVAAEIH SGKTFNTVLG
PLSFDKKGDI TKLDYVVYVW KDGAYTQL
|
|---|
| |