| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3870 |
|---|
| Symbol | |
|---|
| ID | 5422111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 4288239 |
|---|
| End bp | 4289279 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640883126 |
|---|
| Product | HpcH/HpaI aldolase |
|---|
| Protein accession | YP_001418751 |
|---|
| Protein GI | 154247793 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2301] Citrate lyase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGC CACGCCAATT CTTCAAGCCG CTGGCCATCG GTGCGCCCGC ACCTTACCGC
GAGCTGCCGG TGCAGCTGGA GCGCATGATT CACTTCGTGC CACCGCACCT CGAAAAGATG
CGCGCGAAGG TGCCGGACAT CGCCAAGCAG GTGGATGTGG TGCTCGGCAA CCTCGAGGAC
GCCATCCCTT CCGACGCCAA GGAAGCCGCC CGCCGGGGCT TCATCGAGAT GGCCAAGGCC
ACCGATTTCG GCTCCACCGG CCTGTGGACC CGCATCAACT GTCTCAACAG CCCCTGGGTG
CTGGACGATA TCGTTGAGAT CGTCAGCGAG ATCGGCGGCA AGCTCGACGT GATCATGCTG
CCCAAGGTGG AAGGCGCCTG GGACGTGCAC TATCTCGACC AGCTGCTGGC CCAGCTGGAG
GCCAAGCACG CCATCGGCAA GCCCATCCTC ATCCACGCCA TCCTGGAGAC CGCCGAGGGC
GTGAAGAATG TGGAGGAGAT TGCCAGCGCC TCCCCGCGCA TGCACGGCAT GAGCCTCGGC
CCGGCGGACC TTGCCGCCTC CCGCGCCATG AAGACCACCC GCGTCGGCGG CGGCCATCCG
GACTACAAAG TGCTAGCGGA CGCGGACGGC GACAAGCCGC GCGCCGGCTA CCAGCAGGAC
CTGTGGCACT ACACCGTCGG CAAGATGGTG GACGCCTGCG CCGCCAACGG CATCAAGCCC
TTCTACGGTC CGTTCGGCGA CTTCTCGGAT CTCGCCGCCT GCGAGAGCCA GTTCCGCAAC
GCCTTCCTGC AGGGCTGCGT CGGCGCCTGG TCGCTGCACC CCACCCAGAT CGACATCGCC
AAGCGCGTGT TCTCCCCCGA TCCGGGCGAG GTGGCCTTCG CGCTCAAGAT CCTGGAAGCC
ATGCCCGACG GCGCCGGCGC GGTGATGATC GACGGCAAGA TGCAGGACGA CGCCACCTGG
AAGCAGGCCA AGGTGATCGT CGATCTTGCC CGTATTGTCG CAGCCAAGGA TCCGGAAATG
GGCAAAGCCT ACGGACTGTG A
|
|---|
| Protein sequence | MKLPRQFFKP LAIGAPAPYR ELPVQLERMI HFVPPHLEKM RAKVPDIAKQ VDVVLGNLED
AIPSDAKEAA RRGFIEMAKA TDFGSTGLWT RINCLNSPWV LDDIVEIVSE IGGKLDVIML
PKVEGAWDVH YLDQLLAQLE AKHAIGKPIL IHAILETAEG VKNVEEIASA SPRMHGMSLG
PADLAASRAM KTTRVGGGHP DYKVLADADG DKPRAGYQQD LWHYTVGKMV DACAANGIKP
FYGPFGDFSD LAACESQFRN AFLQGCVGAW SLHPTQIDIA KRVFSPDPGE VAFALKILEA
MPDGAGAVMI DGKMQDDATW KQAKVIVDLA RIVAAKDPEM GKAYGL
|
|---|
| |