| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3556 |
|---|
| Symbol | |
|---|
| ID | 5421881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 3970067 |
|---|
| End bp | 3970951 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640882810 |
|---|
| Product | glucose-1-phosphate thymidylyltransferase |
|---|
| Protein accession | YP_001418441 |
|---|
| Protein GI | 154247483 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.305082 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.867096 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGGA TCATTCTCGC CGGCGGATCG GGCACTCGGC TCTATCCGAT CACCAAGGCT
GTCTCGAAGC AGCTCATGCC GGTCTACGAC AAGCCGATGA TCTACTACCC GCTGACCACG
CTGATGCTGG CGGGAATCCG GGAGATCCTC ATCATCACCA CGCCGCATGA TGCGGAAGCC
TTCGCCCGCC TCCTGGGGGA CGGCACGCAG TGGGGCATCC AGATCAGCTA CGCGGTGCAG
CCGAGCCCGG ACGGGCTGGC GCAGGCCTTC ATCATTGGCG CGGACTTCGT TGCCGGCGGG
CCGTCGGCGC TGATCCTCGG CGACAATATC TATTACGGCC ACGGCCTGCC GGAATTGCTG
CGCGCCGGCA GCGCGCAGGG CAAGGGCGCC CGTGTGTTCG CCTATCATGT GACCGATCCC
GAGCGCTACG GCGTGGTCGA GTTCGACCCC TCGATGCGGG CGATCTCCAT CGAGGAAAAG
CCGGCGCAGC CCAAGAGCAA CTGGGCGGTG ACCGGGCTTT ATTTCTACGA CGAGCAGGTG
GTGGACATCG CCGCCAACCT GAAGCCGTCC CCCCGGGGCG AGCTGGAGAT CACCGATCTC
AACCGCGTGT ACCTGGAAAA GGGCGAGCTC TCGGTGGAAC TCATGGGCCG CGGCTATGCC
TGGCTCGACA CCGGCACGCC GGACAGCCTG CTCGACGCGG CCGACTTCGT CGCGACCCTG
GAGAAGCGCC AGGGTTTCAA GATCGCCTGC CCTGAAGAGG TGGCGTATCG CATGGGGTTC
ATCGACGTGA ACCAGCTTGG CGAACTGGCT GTTGCCCTGG GCAAGAGCAA TTACGGCAAG
TATCTCGCGC AGATCGTCAA GCAGAAGGGG AGCGTGGGCG TCTGA
|
|---|
| Protein sequence | MKGIILAGGS GTRLYPITKA VSKQLMPVYD KPMIYYPLTT LMLAGIREIL IITTPHDAEA
FARLLGDGTQ WGIQISYAVQ PSPDGLAQAF IIGADFVAGG PSALILGDNI YYGHGLPELL
RAGSAQGKGA RVFAYHVTDP ERYGVVEFDP SMRAISIEEK PAQPKSNWAV TGLYFYDEQV
VDIAANLKPS PRGELEITDL NRVYLEKGEL SVELMGRGYA WLDTGTPDSL LDAADFVATL
EKRQGFKIAC PEEVAYRMGF IDVNQLGELA VALGKSNYGK YLAQIVKQKG SVGV
|
|---|
| |