Gene Xaut_3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_3540 
Symbol 
ID5421781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3950051 
End bp3951466 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content66% 
IMG OID640882795 
Producthypothetical protein 
Protein accessionYP_001418426 
Protein GI154247468 
COG category[S] Function unknown 
COG ID[COG2308] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.182118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCATG CGTTTGATGA AATGTCCAGT GCCGACGGCT CGGTCAGGCC GGCCTACGAG 
ACCCTGCAGC GCTGGCTCGC CAGCGTTCCC CAGGAGGTTC TGGACCACCG TCGCAAGGAG
GCGGAGTTCA TTTTCCGCCG AATCGGCATC ACCTTCGCCG TCTACGGCGA GCAGAATTCC
CAGGAGCGCC TGATCCCGTT CGACATGGTC CCGCGCATCA TCACCAAGGA TGAGTGGGCC
ACCCTGTCCA AGGGCCTGGA ACAGCGCGTC AAGGCGCTGA ACATGTACAT CCGCGACGTG
TACACCAAGC GGGAGGTGCT CAAGGCCGGG GTGGTGCCGG AAAACCTCGT CTACCAAAAC
CCGGCGTTCC GCCCGGAGAT GAACGGCCAG CGCGTGCCGC ACGATCTCTA CGTGCACATC
GCCGGCATCG ACATCGTGCG CACCGACCCC GACACCTTCT ACGTGCTCGA GGACAACGCC
CGCACCCCCT CCGGCGTCTC CTACATGCTG GAGAACCGGG AGATCATGCT CCGCCTGTTC
CCGGAGCTGT TCTCCCTGCA CAAGGTGGCT CCGGTCGACA AATACGGCGA CGACCTGCTC
GCCACGCTCC GCTCGCTGGC GCCCCATGGC GGGCATGAGC CGAACGTGGC CATCCTCACC
CCCGGCATCT ACAACTCGGC CTATTACGAG CACTCGTTCC TGGCCGACAA GCTGGGCGTG
GACTTGGTGG AGGGCCGCGA CCTGTTCGTG AAGGATGCGG TGGTCTACAT GCGCACCACC
GAGGGGCCCA AGCGCGTGGA CGTGATCTAC CGCCGCCTCG ACGACGACTT CCTCGACCCC
CTGATGTTCC GGCGCGACAG CCAGCTCGGC GTGCCCGGCC TCATGAGCGC CTACCACGCC
GGCAACGTCA CCCTCACCAA TGCGGTGGGA ACCGGCGTCG CCGACGACAA GGCGGTCTAT
TCCTACATGC CGGACATCAT CCGCTTCTAT CTCGGCGAGG AACCCCTGCT GCCGAACGTC
CCCACCTGGC GCTGCCGCGA GCCTGACCAC CTCAAGTATG TGCTGGAGCA CCTGCCCGAG
CTGGTGGTGA AGGAAGTGCA CGGCTCCGGC GGCTACGGCA TGCTGGTGGG CCCGGCCTCG
GACAAGGCGC AGATCGAGAA GTTCCGCGCC AAGCTGGTGG CGGACCCGGC CAACTTCATC
GCCCAGCCGA CGCTGGCTTT GTCCACCTGC CCCACCATGG TGGAAAAGGG CGTCGCCCCC
CGCCACGTGG ACCTGCGGCC CTTCATCCTC TCCGGCTCGG ACAAGGTGCG CATCGTGCCC
GGCGGCCTCA CCCGCGTCGC CATGAAGGAG GGTTCGCTGG TGGTGAATTC CAGCCAGGGC
GGCGGCACCA AGGACACCTG GGTTCTCGAC GCCTGA
 
Protein sequence
MPHAFDEMSS ADGSVRPAYE TLQRWLASVP QEVLDHRRKE AEFIFRRIGI TFAVYGEQNS 
QERLIPFDMV PRIITKDEWA TLSKGLEQRV KALNMYIRDV YTKREVLKAG VVPENLVYQN
PAFRPEMNGQ RVPHDLYVHI AGIDIVRTDP DTFYVLEDNA RTPSGVSYML ENREIMLRLF
PELFSLHKVA PVDKYGDDLL ATLRSLAPHG GHEPNVAILT PGIYNSAYYE HSFLADKLGV
DLVEGRDLFV KDAVVYMRTT EGPKRVDVIY RRLDDDFLDP LMFRRDSQLG VPGLMSAYHA
GNVTLTNAVG TGVADDKAVY SYMPDIIRFY LGEEPLLPNV PTWRCREPDH LKYVLEHLPE
LVVKEVHGSG GYGMLVGPAS DKAQIEKFRA KLVADPANFI AQPTLALSTC PTMVEKGVAP
RHVDLRPFIL SGSDKVRIVP GGLTRVAMKE GSLVVNSSQG GGTKDTWVLD A