Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_3532 |
Symbol | |
ID | 5421836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 3939645 |
End bp | 3943103 |
Gene Length | 3459 bp |
Protein Length | 1152 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640882787 |
Product | outer membrane autotransporter |
Protein accession | YP_001418418 |
Protein GI | 154247460 |
COG category | [S] Function unknown |
COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCGC TGTACGCCTC GTCGAGCCGC CTCGTCCTCT CCCTGTTCCT GGTCGGCATG GCGGCGCCCG CGCTCGCGGC CTCCTTCACC GTGCCGCCCG CCGCTGGGCA GCAGAGCGTG TCCGGCAGCG ACACCGGCAC CATCGACGAG GGCGCGACGC TCGCGGGCGG GGGCTCCTCG GCCATTCAGT GGAGCGCGGC GGCCACCGCC AACCCCGGTG TTGTCATCAT CAACAACGGC ACCATCACCT CGAACACCCG CACCATCGAT ACGGCGAGCA ACGTCACCGG CGCCTTCACG CTGACGAACA ACGGCAGCAT AATTTCGAAG GACGATGCCT TCCGCATCAA CGGCGCGCTG GCGAACGGCA CGGTGACCAT CACCAATTCC GGCACCATCA GCTCCCAGAC CGGGCAGGGG TTCGATTTCG ACAAGGCGAC GGCGACCACC GCCAAGGTGT CGGTGGACAA TTCCGGCACC ATCTCCTCTG CCGGCTCCGA TGCGATCCGG CTCGGCGGCG GCACCATCGA CATCACCAAT TCCGGCACCA TCGAGACCAC GTCGAGCGGC AAGCGCGCCA TCAAGTTCGA CACCGCGGCC AATTTCGACA CGCTCCAGTC GTTCACCCTG ACCAACAAAC TGGGTGGCGT GGTTGCGGGC ACGGACGACG GCATCAAGAT AAGCTCGACG GTCGGCAGCA CCGCCGCGCC GGTCATCAAG ATCGACAATG CCGGCACCAT CAAGTCGACC ATCGATGGCC AGGGCATCGA CCTGGGCGGC ATCTATTCCA CCGCCGCCAC CATCACCATC ACCAACCGGT CCACCGGCCT GATCACCGCC GCCGACAATG ACGGCATCCA GGGCACGAAC GGCCTCACCA TCGACAATTA CGGGACCATC TCGTCCTATT ACGCGGCCGG GACGGCGGAC ACCCAGAACA ACTCGGCCAT CAAGGTCGAT GGCGACGACA TCGCCAAGGC GATTACCATC ACGGTGAACA ATTACGAGGG CGGCCTGATC TCCGGCGCCT ATCACGGCAT CAAGGGGTCG GGCGCCAGCG ACACGCTCAT CGTCACCAAT TCGGGGACCA TCGAGGGCCG CAACGGCTCG GGCGTGAATT CCAACGGCAC CGGCACCCTC ACCAATTATG GCACCATCAC CGGGACCTAT GATCCCGCCG CGAGCTTCGG CGACGGCGAC GGCGTGGATT TCGACCATGC CGGGACGGTC TACAACTACG GCACCATCAA GGGTCTCGGC TCCAAGGGCA TCAAGCCGGG CGAGGAGAAG CCCAGCACCA GCGAAGGCAT CGCCATCGGC GGCGGCACCA TCGTCAACGG CGATGCGACC CACACCTCGG CGCTGATCTC CGGCGCCAAC AACGGCATCC TCGCCGACGA CAGCAACAGC GGCGACGCCT ATGCCGCCAT GAGCGTCACC AATTACGGCA CCATCCAGGG CCTCGACGGC TACGGCATCC GCTATGTGAA TTCCGGCGTC GACAGCTCGA AAAGCCTCAC CATCGTCAAT TACGGCACCA TCTCCGGCAC CACCTATGCG GTTGAGATGG GCGGCGGCAA CGACCTGTTC GTCTACCATA CCGGCAGCAA GGTGACCGGC ATCGTGGACG CGGAGGGCGG GACGGACACC CTCCAGCTCG GCGCGCTCGG CGACAACGTC ACCTTCGACG CCAGCCTTAT CGGCGATGCC GCCACCTATC GCCATTTCGA GCGGGTCACC GCCGAGGCGC AGACCCAGAC CACCCTCACC GGTACCTCGA CTTTCGCCGG GGACCTGGTG TTCGACCAGT CGGCGCTCGC CCTCGACAAC GCGTCGCTTG CCAAGGCGAG CCTGATCCTG TCGGGCAATG AGACCAACGC CGGCGTGCTC ACCGGTAACG GCACCCTCGG CAGCCTTGCG GCCTCAGGCA CGGTCTTCCT CTCCCCCGGC ACCAGCGCCG CGCCCTACGG CACCCTCGCG GTGACCGGCA ATGCGACGCT GGCCGGCACC TACCTGGTGG ACGTGGCGCA GAACGGCAAG ACCGACCTCA TCACCGTGGG CGGCACTGCC ACCATCGCCG AAGGCGCACA GGTGGCGATG TATGGCGCCC TCGCCTGGAG CCGCATCTAC ACCATCGTGT CGTCCGACAC CCAGGTGTCC GGCACCTTCG CCGGGCTGAC CGTGGCGAAC CCCATCAACT ATCTCTTCGT CACCCCGGAG CTGAGCTACG ACGATACCCG CGTCACCCTG GCGCTGGAGC GCACCGGCGT GGCCTTCGCC AGCTACGCTT TGACCCGCAA CCAGCTCTCG GTAGCCGGCG CGCTGGAGCG CATCGGCGGC AGCGACAAGG CGCGCTCCTC CACCCTCTAC GGCGACTTCG CCACCCAGGT AGCGGGCGAC AACCCGAGCC TCGCTCTGGC CCAGCTCTCC GGCGATATCC ACGCCACCCT GCCGGGACAG ATCGCCACCG AGAACATGCT GGTCAACGAC CTCATCCTCG GCCGGCTGCG GCAGGCGGAT TATGCGGGCG CCAAGGGCAG CACCGCGGCG CTCGGGGCCG GCGGGCCGGC GCGGGCCTAT GCCGAACCGT CGTCTCCCGG GGCCAGCGCC TTCAAGGCCA TCAAGGCGCC CACCGACGCG CCGGTATGGA CCGGCTGGGC CCAGGGCTAC GGCCAGTGGC TCTCCACCGA TTCCAACGGC AATGCCGCCG CCGCCGACAC CAATCTGGGC GGCGTGCTGC TCGGCGGCGA CGTGAGCCTT GCCAACACCG TGTTCGGCCT CGCGGCCGGC TATTCCTCCG CCTCCACCAG CACCGACTTC GCCTCGGCGG ACACCGAGAC CTGGCGCATC GCCGCCTATG GCGGAGCACG CTTCGACGCC ATCAAGCTGC GGGCCGGGGC GTCCTACGGC TGGAGCAGCA TCGACACCAG CCGCTTCGTC GCCCTCACCG GCGAGGCGCC CAGGGCGAGC TATGACGGCA CTGCTGGCAA CCTGTTCGCG GAAGCCGGCT ATACGGTCGC GCTGGGCGGG GTGGCGTTCG AGCCCTTCGC CGGGATCGGC TGGACCAGCG TGAACCTCGG CAGCTTCGCC GAGACCAACG CCCCAGTGGC GGGCCTTGCC TCCGAGGGCA CGTCGTTCGA CACCGCCTAC ACCACGCTGG GCCTGCGCCT CGCCACCACC TTCGCGGTGG GCAGCGGCAT CGCCGTGACC CCTCACGCCT CGGCCGGCTG GCGCCATGCG TTCGGCGACG TGGTGCCCGA GGCGGCTGTG GCCTTCGTGA ACACCGGCAC TGTGTTCGGT GTCGAGGGCC TACCCATCGC GCAGGACAGC CTGGTGGGGA GCCTTGGCAT CGACCTCGCC TTCGCCACCG GCGTCACGCT GACCCTCGCC TATGACGGCA TGGCCGGCGA CGGCGCCAGC TACAACGCCG GCAAGGCCGC GCTGGCGGTG AAGTTCTGA
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Protein sequence | MPALYASSSR LVLSLFLVGM AAPALAASFT VPPAAGQQSV SGSDTGTIDE GATLAGGGSS AIQWSAAATA NPGVVIINNG TITSNTRTID TASNVTGAFT LTNNGSIISK DDAFRINGAL ANGTVTITNS GTISSQTGQG FDFDKATATT AKVSVDNSGT ISSAGSDAIR LGGGTIDITN SGTIETTSSG KRAIKFDTAA NFDTLQSFTL TNKLGGVVAG TDDGIKISST VGSTAAPVIK IDNAGTIKST IDGQGIDLGG IYSTAATITI TNRSTGLITA ADNDGIQGTN GLTIDNYGTI SSYYAAGTAD TQNNSAIKVD GDDIAKAITI TVNNYEGGLI SGAYHGIKGS GASDTLIVTN SGTIEGRNGS GVNSNGTGTL TNYGTITGTY DPAASFGDGD GVDFDHAGTV YNYGTIKGLG SKGIKPGEEK PSTSEGIAIG GGTIVNGDAT HTSALISGAN NGILADDSNS GDAYAAMSVT NYGTIQGLDG YGIRYVNSGV DSSKSLTIVN YGTISGTTYA VEMGGGNDLF VYHTGSKVTG IVDAEGGTDT LQLGALGDNV TFDASLIGDA ATYRHFERVT AEAQTQTTLT GTSTFAGDLV FDQSALALDN ASLAKASLIL SGNETNAGVL TGNGTLGSLA ASGTVFLSPG TSAAPYGTLA VTGNATLAGT YLVDVAQNGK TDLITVGGTA TIAEGAQVAM YGALAWSRIY TIVSSDTQVS GTFAGLTVAN PINYLFVTPE LSYDDTRVTL ALERTGVAFA SYALTRNQLS VAGALERIGG SDKARSSTLY GDFATQVAGD NPSLALAQLS GDIHATLPGQ IATENMLVND LILGRLRQAD YAGAKGSTAA LGAGGPARAY AEPSSPGASA FKAIKAPTDA PVWTGWAQGY GQWLSTDSNG NAAAADTNLG GVLLGGDVSL ANTVFGLAAG YSSASTSTDF ASADTETWRI AAYGGARFDA IKLRAGASYG WSSIDTSRFV ALTGEAPRAS YDGTAGNLFA EAGYTVALGG VAFEPFAGIG WTSVNLGSFA ETNAPVAGLA SEGTSFDTAY TTLGLRLATT FAVGSGIAVT PHASAGWRHA FGDVVPEAAV AFVNTGTVFG VEGLPIAQDS LVGSLGIDLA FATGVTLTLA YDGMAGDGAS YNAGKAALAV KF
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