| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3328 |
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| Symbol | |
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| ID | 5423317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 3700972 |
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| End bp | 3702063 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640882577 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001418214 |
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| Protein GI | 154247256 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0914439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCC GTGATTTCCT GACCGCCGCC GGTGCGGGCG TTGCCGCGTC CGCCGCCGTC
GCCATGCCGG CCATCGCCCA GTCGGCGCCG GAAGTGAAAT GGCGCTGCGC CTCCTCCTTC
CCCAAGTCGC TGGACACCAT CTATGGCGCC GCCGAGCTGA TGGCGAAGCA GGTGGCCGAG
ATCACCGACG GCAAGTTCCA GATCCAGGTG TTCGCGGCGG GCGAGATCGT CCCCGGCCTG
CAGGCGCTGG ACGCCACCCA GAACAAGACC GTCGAGATGA GCCACTCGGC GTCCTATTAT
TATGTGGGCA AGGACCCCAC CTTCGGCTTC GGCACCGCCG TGCCGTTCGG CCTCAACGCC
CGCCAGATCA ACGCCTGGTT CCTGTTCGGG AACGGCCTGA CCCTGATGAA CGAGTTCTAC
AAGAAGTACG GCGTGGTGAT GTTCCCGGGC GGCAACACCG GCGGCCAGAT GGGCGGCTGG
TTCCGCAAGG AAATCAAGAC CGTGGCCGAC CTGCAGGGCC TCAAGATGCG CATCGCCGGC
ATCGGCGGGC AGGTGCTGGC CAAGCTCGGC GTGGTGCCGC AGCAGCTCGC CGGCGGCGAC
ATCTATCCGG CGCTGGAGAA GGGCACCATC GACGCCGCCG AATGGGTGGG CCCCTATGAC
GACGAGCGCC TCGGCCTCTA CAAGGTGGCG CAGTATTATT ATTTCCCCGG CTGGTGGGAG
GGCTCGGCGG CGCTGAACTT CTTCGTCAAC CAGGAGAAGC TGGCCGAGCT GCCGAAGAAC
TATCGCGCGG CGCTCACCAC TGCCATGGCG CAGGCCAACG AGAGCATGCT GGCGAGCTAC
GACGCCAAGA ACCCCATCGC GGTGCAGAGC CTGGTGAAGG CCGGCACCCA GCTGCGCCGC
TACCCCAACG ACGTGATGGA CGCGGCCTAC AAGGCCTCGC ACCAGCTTTA TGATGAGATC
GCCGCCAAGA ACGAAGACTT CAAGAAGATC TACGAAGACA TGAAGGCGTT CCGCAACAAC
GCCTATCTGT GGTGGCAGAT CGTCGAGTTC ACCTATGACG ACTTCATGGT GCGCGCCCGC
ACCCGCGGCT GA
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| Protein sequence | MKRRDFLTAA GAGVAASAAV AMPAIAQSAP EVKWRCASSF PKSLDTIYGA AELMAKQVAE
ITDGKFQIQV FAAGEIVPGL QALDATQNKT VEMSHSASYY YVGKDPTFGF GTAVPFGLNA
RQINAWFLFG NGLTLMNEFY KKYGVVMFPG GNTGGQMGGW FRKEIKTVAD LQGLKMRIAG
IGGQVLAKLG VVPQQLAGGD IYPALEKGTI DAAEWVGPYD DERLGLYKVA QYYYFPGWWE
GSAALNFFVN QEKLAELPKN YRAALTTAMA QANESMLASY DAKNPIAVQS LVKAGTQLRR
YPNDVMDAAY KASHQLYDEI AAKNEDFKKI YEDMKAFRNN AYLWWQIVEF TYDDFMVRAR
TRG
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