| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3272 |
|---|
| Symbol | |
|---|
| ID | 5422798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 3634037 |
|---|
| End bp | 3634495 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640882519 |
|---|
| Product | alkylhydroperoxidase |
|---|
| Protein accession | YP_001418158 |
|---|
| Protein GI | 154247200 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATC CGCTTTCCCG CCCCACCTAC AAGGCCTTCA CCGAGCGTGC CCCGGATGTC
TATGCGGGGC TGTCCGCCCT CACCAAGGCG GTGGACGCCT CGGGCCTCGA CAAGGGGCTG
ACCGAGCTGG TGAAGCTGCG CGCCTCCCAG ATCAACGGAT GCGCCTTCTG CCTGAAGTTC
CATCTGGGGG TGGCGCGCAA GGCTGGCGTG TCGCAGGACA AGCTCGACCT GCTGGCGGCC
TGGCGGGATG CACCGGCGTT CTCGGCGCGG GAGCGTGCGG CGCTGGCCTA TGCGGAAGAC
CTGACGCAGC TTGAGGCGGA AGCTGCCTCC GATGCGGCCT GGGCGGCGCT TTTGAAGGAA
TTCTCGGAGG ACGAGGCGGT CTTCCTGACG GTGACCATCG CCTCCATCAA CGCCTGGAAC
CGCATCGGCA TCGCCTTGCG CTTCGCGCCG CCAGCCTGA
|
|---|
| Protein sequence | MADPLSRPTY KAFTERAPDV YAGLSALTKA VDASGLDKGL TELVKLRASQ INGCAFCLKF
HLGVARKAGV SQDKLDLLAA WRDAPAFSAR ERAALAYAED LTQLEAEAAS DAAWAALLKE
FSEDEAVFLT VTIASINAWN RIGIALRFAP PA
|
|---|
| |