| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3060 |
|---|
| Symbol | |
|---|
| ID | 5423555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 3399917 |
|---|
| End bp | 3400504 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640882306 |
|---|
| Product | 5-formyltetrahydrofolate cyclo-ligase |
|---|
| Protein accession | YP_001417947 |
|---|
| Protein GI | 154246989 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
|---|
| TIGRFAM ID | [TIGR02727] 5,10-methenyltetrahydrofolate synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.229352 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCG CCGCCGAAAA GAAACGCCTG CGCGCCCTCG CGCTCGGTCG TCGTGCGGCC
ATGGGCGAGG CGGGCCGAGC CGCGGCCTCG CGCGCGGCCG CAAGCCATGC CCTCGCCGCC
GCCGGCGCGG TTCAGGGGCG CGCCGTCGCT CTTTTCGCGC CATTCCGGGA CGAGATCGAC
ACCGCGCCGC TGGCCGACGC CCTGCGCGAG GCCGGAGCGA TCCTCGCCCT TCCCGTCATC
ATCGCCCGCG ACCAGCCGCT CCTGTTCCGC CGCTGGGATC AGGACACGCC GCTCGTCCCC
ACGGGCGCCT TCCGCATTCC CGAGCCGGGG CCGGAGGCGC CGGAGATCAT CCCCGAACTG
CTTCTGGTGC CGCTGGCCGC CTTCGACCGG CGCGGCTTCC GCATCGGCTA TGGGGCCGGC
TTCTACGACC GCACCCTCGC CCTGCTGCGG GCGCAGCGGC CGGTGCGCGC CATCGGCTTT
GCCTTTGCGT GCCAGGAAGT GGACCAGGTG CCCGTCGAGA CCCATGACGA GCCGGTGGAC
ATGATGGTAA CGGATATCGA AGCTTGGGCC GTCGGCCCGC GCGCCTGA
|
|---|
| Protein sequence | MDIAAEKKRL RALALGRRAA MGEAGRAAAS RAAASHALAA AGAVQGRAVA LFAPFRDEID
TAPLADALRE AGAILALPVI IARDQPLLFR RWDQDTPLVP TGAFRIPEPG PEAPEIIPEL
LLVPLAAFDR RGFRIGYGAG FYDRTLALLR AQRPVRAIGF AFACQEVDQV PVETHDEPVD
MMVTDIEAWA VGPRA
|
|---|
| |