| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_3056 |
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| Symbol | |
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| ID | 5424779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 3395637 |
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| End bp | 3396989 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640882302 |
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| Product | beta-propeller repeat-containing to-pal system protein TolB |
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| Protein accession | YP_001417943 |
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| Protein GI | 154246985 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0557578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.412166 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGGT TCGGACGGCC GGCCATGCTC GGGATGGGAC GCCGGGCATT CATCAAGACC
GGACTTGCCG CCGCGAGCCT CGCCGGCCTC GGTGCGGGGC TGGGCACTGG CCCGGCGGGT
GCCGCGCAGC CGCGCATCGA CCTCACCCCC GGTGCCTTCA AGCCCATCCC AATCGCCATC
ACCGACCTGC TCGGCGAGGT CGAGATTGGC CGCAACATTT CCGGCGTCAT CACCGCCGAC
CTGCGGCGCT CGGGCCTGTT CGCGCCCATC GATCCCAAGG CGTTCGTGGA GCAGATCACC
AATCCCGATA CGCCGCGCTT CCAGGACTGG CGCGTCATCA ATGCCCAGGC GCTGCTCACC
GGCCGGGTCA CCCGGCAGGC GGACGGGCGC TTCCAGGTGG TGTTCCGCCT GTGGGACGTG
TTCGCCGGCC AGCAGCTCGC CGCCCAGCAG TTCGTCGCCC AGCCCGACAA CTGGCGCCGC
ATCGCCCACA TCATCGCCGA CGCCATCTAT GAGAAGATGA CCGGCGAAAA GGGCTATTTC
GACACCCGCA TCGTGTTCGT GGACGAGAGC GGCCCGAAGG AGCGGCGGGT CAAGCGCCTC
GCCATCATGG ACCAGGACGG CGCCAACGTG AGCTATCTGT CGCGCGGCGA CGGCCTCGTG
CTCACCCCGC GCTTCTCGCC CACCAGCCAG GAAATCACCT ACATGTCCTA TGGGGCGGGT
GACCCCAAGG TGTTCCTTCT GAACATCGAG ACCGGCCAGC GCGAGATCGT CGGCAACTTC
CCGGGCATGA GCTTCTCGCC ACGCTTCGCC CCGGACGGGC AGCGGGTGAT CATGAGCCTG
CAGCAGGGCG GCAATTCCAA CATCTTCGTC ATGGACCTGC GCTCGCGCGC CACCACCCGC
CTCACCGACA CCGCCGCCAT CGACACCGCC CCCTGCTATT CGCCGGACGG CCGGCAGATC
TGCTTCGAGA GCGATCGCGG CGGCACCTCG CAGATCTATG TGATGAATGC CGACGGCTCC
GGCGCGCGGC GCATCTCGTT CGGCAATGCG CGCTACTCGA CCCCGGTGTG GTCGCCCAAG
GGCGACTGGA TCGCCTACAC CCGCCAGGCC GAAGGCCGCT TCGCCATCGG CGTGATGCGC
ACCGACGGCT CGGGCGAGCG CGTGCTCACC GAGGGCTACC ACAACGAGGG GCCGACGTTC
GCGCCCAACG GCCGCGTCAT CATGTTCTTC CGCGATCCCG GCGGCGCCTC CGGGCCGTCG
CTCTATTCGG TGGACGTGAC CGGCTACAAC GAGCAGCGCG TGCCCACCCC GAGCTATGCC
TCTGACCCCG CCTGGTCGCC CCTGCGCTCC TGA
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| Protein sequence | MNGFGRPAML GMGRRAFIKT GLAAASLAGL GAGLGTGPAG AAQPRIDLTP GAFKPIPIAI
TDLLGEVEIG RNISGVITAD LRRSGLFAPI DPKAFVEQIT NPDTPRFQDW RVINAQALLT
GRVTRQADGR FQVVFRLWDV FAGQQLAAQQ FVAQPDNWRR IAHIIADAIY EKMTGEKGYF
DTRIVFVDES GPKERRVKRL AIMDQDGANV SYLSRGDGLV LTPRFSPTSQ EITYMSYGAG
DPKVFLLNIE TGQREIVGNF PGMSFSPRFA PDGQRVIMSL QQGGNSNIFV MDLRSRATTR
LTDTAAIDTA PCYSPDGRQI CFESDRGGTS QIYVMNADGS GARRISFGNA RYSTPVWSPK
GDWIAYTRQA EGRFAIGVMR TDGSGERVLT EGYHNEGPTF APNGRVIMFF RDPGGASGPS
LYSVDVTGYN EQRVPTPSYA SDPAWSPLRS
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